RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 G6PDP11413 515 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 RNH1P13489 461 aaKnown RBP13.56□□□□□ -0.24
UPF1-211ENST00000600868 FBLP22087 321 aaKnown RBP13.56□□□□□ -0.24
UPF1-211ENST00000600868 IL10P22301 178 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 TACR1P25103 407 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 SLC5A2P31639 672 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 HNRNPH2P55795 449 aaKnown RBP13.56□□□□□ -0.24
UPF1-211ENST00000600868 RAB38P57729 211 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 TAS2R50P59544 299 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 OLR1P78380 273 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ARHGAP40Q5TG30 622 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 C6orf15Q6UXA7 325 aaPredicted RBP13.56□□□□□ -0.24
UPF1-211ENST00000600868 ZNF517Q6ZMY9 492 aaPredicted RBP13.56□□□□□ -0.24
UPF1-211ENST00000600868 IKBIPQ70UQ0 350 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 MED25Q71SY5 747 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 CLNKQ7Z7G1 428 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ANKS4BQ8N8V4 417 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 GALNT6Q8NCL4 622 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 OR51Q1Q8NH59 317 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ADAMTS18Q8TE60 1221 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.56□□□□□ -0.24
UPF1-211ENST00000600868 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ASCL3Q9NQ33 180 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 SLC22A11Q9NSA0 550 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 MRGBPQ9NV56 204 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 HCN3Q9P1Z3 774 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 HEY2Q9UBP5 337 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 FBXW2Q9UKT8 454 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ACSL6Q9UKU0 697 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 ATG4BQ9Y4P1 393 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 NEUROG3Q9Y4Z2 214 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 SPACA6W5XKT8 324 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 SEC16AO15027 2179 aa13.56□□□□□ -0.24
UPF1-211ENST00000600868 IGLV3-12A0A075B6K2 115 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 A0A1W2PR48 441 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 CYR61O00622 381 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 NDUFAB1O14561 156 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 ANKRD28O15084 1053 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 PRMT3O60678 531 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 TLX1P31314 330 aaPredicted RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 BUD31P41223 144 aaPredicted RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 ATP4BP51164 291 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 CLDN8P56748 225 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 C21orf58P58505 322 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 CBX1P83916 185 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 MAT1AQ00266 395 aaKnown RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 KLC1Q07866 573 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 PTGR1Q14914 329 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 RPS6KA2Q15349 733 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 PDCD4Q53EL6 469 aaKnown RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 FAM71E1Q6IPT2 247 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 COX15Q7KZN9 410 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 TIPARPQ7Z3E1 657 aaKnown RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 FKBP10Q96AY3 582 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 NXPE2Q96DL1 559 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 RNF31Q96EP0 1072 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 EGLN2Q96KS0 407 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 CATSPER2Q96P56 530 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 TSSK3Q96PN8 268 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 OR1F2PQ96R84 312 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 FAIM2Q9BWQ8 316 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 TGIF2Q9GZN2 237 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 ZNF385DQ9H6B1 395 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 MKKSQ9NPJ1 570 aaPredicted RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 PRDM9Q9NQV7 894 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 SDR39U1Q9NRG7 319 aaPredicted RBP13.55□□□□□ -0.24
UPF1-211ENST00000600868 TRPC4Q9UBN4 977 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 BAIAP2L1Q9UHR4 511 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 PADI1Q9ULC6 663 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 MAPRE3Q9UPY8 281 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 FER1L5A0AVI2 2057 aa13.55□□□□□ -0.24
UPF1-211ENST00000600868 SPTBN4Q9H254 2564 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 BLACEA4D250 179 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 TRABD2BA6NFA1 517 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 PSMD12O00232 456 aaPredicted RBP13.54□□□□□ -0.24
UPF1-211ENST00000600868 CCDC22O60826 627 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 AIFM1O95831 613 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 ALBP02768 609 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 IL3P08700 152 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 CCNYL3P0C7X3 344 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 DRD2P14416 443 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 NCF2P19878 526 aaPredicted RBP13.54□□□□□ -0.24
UPF1-211ENST00000600868 PRPS1L1P21108 318 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 CPN2P22792 545 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 XCR1P46094 333 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 SHC2P98077 582 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 TNFRSF17Q02223 184 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 C2orf80Q0P641 193 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 SQLEQ14534 574 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 HEPACAMQ14CZ8 416 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 SYT16Q17RD7 645 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 NDUFAF5Q5TEU4 345 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 OVCH1Q7RTY7 1134 aa13.54□□□□□ -0.24
UPF1-211ENST00000600868 CPSF7Q8N684 471 aaKnown RBP13.54□□□□□ -0.24
UPF1-211ENST00000600868 ESX1Q8N693 406 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms