RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TMEM52Q8NDY8 209 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 C7orf57Q8NEG2 295 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 KCTD4Q8WVF5 259 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 TSC22D4Q9Y3Q8 395 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 A0A096LPK6 155 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 TGFBR3LH3BV60 316 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 FCHO1O14526 889 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 MYO1DO94832 1006 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 SCELO95171 688 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 UNC5CO95185 931 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 TUBB4AP04350 444 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 CYB561P49447 251 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 HLCSP50747 726 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 IRF9Q00978 393 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 PMP22Q01453 160 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 RBPJQ06330 500 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 SLC13A2Q13183 592 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 BMPR2Q13873 1038 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 SETDB1Q15047 1291 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 ZRSR2Q15696 482 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 KRTCAP3Q53RY4 240 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 ZNF468Q5VIY5 522 aaPredicted RBP16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 GRHL2Q6ISB3 625 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 METTL2BQ6P1Q9 378 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 CHSY3Q70JA7 882 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 UBE3DQ7Z6J8 389 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 FAM47BQ8NA70 645 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 FAM98AQ8NCA5 519 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 OR7G3Q8NG95 312 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 THAP3Q8WTV1 239 aaPredicted RBP16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 CMTM7Q96FZ5 175 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 VMP1Q96GC9 406 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 HES7Q9BYE0 225 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 ADAP2Q9NPF8 381 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 KLHL1Q9NR64 748 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 PNO1Q9NRX1 252 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 KCMF1Q9P0J7 381 aa16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 DMGDHQ9UI17 866 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-203ENST00000597209 NME2P1O60361 137 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ALDOAP04075 364 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 NME2P22392 152 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ATP5A1P25705 553 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 TYK2P29597 1187 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 SERPINB8P50452 374 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ARFIP1P53367 373 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ALDH18A1P54886 795 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 PCBP2Q15366 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ELAVL1Q15717 326 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 GLE1Q53GS7 698 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 DEPDC1Q5TB30 811 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 LIPJQ5W064 366 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 KLC3Q6P597 504 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ZNF793Q6ZN11 406 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 GALNTL5Q7Z4T8 443 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ZNF227Q86WZ6 799 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 TMEM132CQ8N3T6 1108 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 ISL2Q96A47 359 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 MRRFQ96E11 262 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 GPR78Q96P69 363 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 SVILO95425 2214 aa16.73■□□□□ 0.27
CHMP2A-203ENST00000597209 TRBV11-1A0A0K0K1C0 115 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 UGDHO60701 494 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 SLC25A12O75746 678 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 TGFB1P01137 390 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 PCNAP12004 261 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 HIST1H1TP22492 207 aaPredicted RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 PIK3CBP42338 1070 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 ST13P50502 369 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 ALDH6A1Q02252 535 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 AP5B1Q2VPB7 878 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 C1QL3Q5VWW1 255 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 KHDRBS2Q5VWX1 349 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 FJX1Q86VR8 437 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 TEX9Q8N6V9 391 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 ACOT4Q8N9L9 421 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 SLC44A1Q8WWI5 657 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 NCLNQ969V3 563 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 GPR137Q96N19 417 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 FRMD6Q96NE9 622 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 CSF3RQ99062 836 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 CCDC77Q9BR77 488 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 CDC42EP4Q9H3Q1 356 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 VTI1BQ9UEU0 232 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 ZNF223Q9UK11 482 aaPredicted RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 ANGPTL3Q9Y5C1 460 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 PCDHGA11Q9Y5H2 935 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 TNPO3Q9Y5L0 923 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 SPACA6W5XKT8 324 aa16.72■□□□□ 0.27
CHMP2A-203ENST00000597209 ZFAND5O76080 213 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 GFAPP14136 432 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 PPP2R1BP30154 601 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 CA7P43166 264 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 MAGEA12P43365 314 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 PIK3CGP48736 1102 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 SERTAD2Q14140 314 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 MAPKAPK3Q16644 382 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 PFKFB4Q16877 469 aa16.71■□□□□ 0.27
CHMP2A-203ENST00000597209 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms