RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 SGK494L7N484 410 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 KLF7O75840 302 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-207ENST00000597136 SMIM10L1P0DMW3 83 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 RPS15P62841 145 aaKnown RBP14.18□□□□□ -0.14
TRIM28-207ENST00000597136 CXADRP78310 365 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 RGS1Q08116 209 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 TBL3Q12788 808 aaKnown RBP14.18□□□□□ -0.14
TRIM28-207ENST00000597136 FAM53BQ14153 422 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 ERV3-1Q14264 604 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 NCF4Q15080 339 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 AP5B1Q2VPB7 878 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 ADPRMQ3LIE5 342 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 GALNTL6Q49A17 601 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 ATP6AP1LQ52LC2 224 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 VWA2Q5GFL6 755 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 C6orf136Q5SQH8 315 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 SHISA6Q6ZSJ9 500 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 SMIM10Q96HG1 83 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 PPP3R2Q96LZ3 170 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 F2RL3Q96RI0 385 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 GPR87Q9BY21 358 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 MRPL1Q9BYD6 325 aaKnown RBP14.18□□□□□ -0.14
TRIM28-207ENST00000597136 LRTM1Q9HBL6 345 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 C1orf109Q9NX04 203 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 ARL2BPQ9Y2Y0 163 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 NAALAD2Q9Y3Q0 740 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 PCDHGA6Q9Y5G7 932 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 C21orf140B9A014 251 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 K7ENP7 123 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 SAP18O00422 153 aaKnown RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 SEC22BO75396 215 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 CREG1O75629 220 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 SEMA3DO95025 777 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 RAB40ALP0C0E4 278 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 PRKAR1AP10644 381 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 LBPP18428 481 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 TMPRSS3P57727 454 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 STXBP1P61764 594 aaKnown RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 VAC14Q08AM6 782 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 KIAA0040Q15053 153 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 NDUFA9Q16795 377 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 DEFB134Q4QY38 66 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 RFTN2Q52LD8 501 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 TMEM35AQ53FP2 167 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 OGFOD2Q6N063 350 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 PRMT9Q6P2P2 845 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 INO80CQ6PI98 192 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 LAPTM4BQ86VI4 370 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 OR5T3Q8NGG3 340 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 CHTF18Q8WVB6 975 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 STARD8Q92502 1023 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 MS4A6EQ96DS6 147 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 APIPQ96GX9 242 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 METTL2AQ96IZ6 378 aaKnown RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 YIPF2Q9BWQ6 316 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 REXO4Q9GZR2 422 aaKnown RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 GPN3Q9UHW5 284 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 KCND3Q9UK17 655 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 TCFL5Q9UL49 500 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 SLC22A7Q9Y694 548 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 NUP214P35658 2090 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 C9J4A7 227 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 E9PBE3 544 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 KLHL41O60662 606 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 KLHL18O94889 574 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 NSA2O95478 260 aaKnown RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 ALOX12P18054 663 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 FBLP22087 321 aaKnown RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 OLR1P78380 273 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 IL10RAQ13651 578 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 NKG7Q16617 165 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 SMU1Q2TAY7 513 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 UBE3DQ7Z6J8 389 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 PRSS58Q8IYP2 241 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 METTL4Q8N3J2 472 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 ANKS4BQ8N8V4 417 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 CCDC197Q8NCU1 140 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 RGMAQ96B86 450 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 MVB12AQ96EY5 273 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 C11orf24Q96F05 449 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-207ENST00000597136 CENPKQ9BS16 269 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 ANKHQ9HCJ1 492 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 CDC14AQ9UNH5 594 aa14.17□□□□□ -0.14
TRIM28-207ENST00000597136 OR2W5A6NFC9 320 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 PLPP1O14494 284 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 GALR3O60755 368 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-207ENST00000597136 RDH16O75452 317 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 JRKO75564 520 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 RAP1GDS1P52306 607 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 PLA2G16P53816 162 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 ERVK-8P63133 956 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 EMX2Q04743 252 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 ACSM2AQ08AH3 577 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 DSG2Q14126 1118 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 SPIN4Q56A73 249 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 METTL21CQ5VZV1 264 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 TMEM198Q66K66 360 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 ACSM2BQ68CK6 577 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 C1orf52Q8N6N3 182 aaKnown RBP14.16□□□□□ -0.14
TRIM28-207ENST00000597136 FNDC5Q8NAU1 212 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms