RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 NMRK1Q9NWW6 199 aa18.23■□□□□ 0.51
PNKP-207ENST00000596014 VPS29Q9UBQ0 182 aa18.23■□□□□ 0.51
PNKP-207ENST00000596014 TRAF6Q9Y4K3 522 aa18.23■□□□□ 0.51
PNKP-207ENST00000596014 NUP210LQ5VU65 1888 aa18.23■□□□□ 0.51
PNKP-207ENST00000596014 SERTM1A2A2V5 107 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 LYPLA1O75608 230 aaPredicted RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 VIMP08670 466 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 RNH1P13489 461 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 ABCE1P61221 599 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 KANK2Q63ZY3 851 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 CLYBLQ8N0X4 340 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 OR1F2PQ96R84 312 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 MRPL1Q9BYD6 325 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 ACPTQ9BZG2 426 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 C20orf27Q9GZN8 174 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 DDX31Q9H8H2 851 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 AHSPQ9NZD4 102 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 C3orf18Q9UK00 162 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 MKL2Q9ULH7 1088 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 DAPP1Q9UN19 280 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 RRP15Q9Y3B9 282 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 FIS1Q9Y3D6 152 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 CDC14CA4D256 554 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 IDSB3KWA1 339 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 HSPA4LO95757 839 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 FHP07954 510 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 OTX2P32243 289 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 SLC1A6P48664 564 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 LIM2P55344 173 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 TBL3Q12788 808 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 CDC20Q12834 499 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 STX3Q13277 289 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 SLAMF1Q13291 335 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 SH2D4BQ5SQS7 431 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 METTL4Q8N3J2 472 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 ZCCHC7Q8N3Z6 543 aaKnown RBP18.22■□□□□ 0.51
PNKP-207ENST00000596014 AGR3Q8TD06 166 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 RBCK1Q9BYM8 510 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 PRORYQ9H606 182 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 LANCL2Q9NS86 450 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 SEMA3GQ9NS98 782 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 KCMF1Q9P0J7 381 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 ZDHHC2Q9UIJ5 367 aa18.22■□□□□ 0.51
PNKP-207ENST00000596014 NBEAQ8NFP9 2946 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 TMEM233B4DJY2 109 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 TCP11X1B4DZS4 312 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 FAM227AF5H4B4 570 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 PSMD12O00232 456 aaPredicted RBP18.21■□□□□ 0.51
PNKP-207ENST00000596014 EEDO75530 441 aaKnown RBP18.21■□□□□ 0.51
PNKP-207ENST00000596014 HEXBP07686 556 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 EFNA3P52797 238 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 EMP2P54851 167 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 HMGCS1Q01581 520 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 BST1Q10588 318 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 COL28A1Q2UY09 1125 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 MINDY4Q4G0A6 757 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 MED25Q71SY5 747 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 TRIM46Q7Z4K8 759 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 NUDT13Q86X67 352 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 RAB43Q86YS6 212 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 HOMEZQ8IX15 550 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 LYRM4Q9HD34 91 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 DNAJC15Q9Y5T4 150 aa18.21■□□□□ 0.51
PNKP-207ENST00000596014 KMT2BQ9UMN6 2715 aaPredicted RBP18.21■□□□□ 0.51
PNKP-207ENST00000596014 OR2W5A6NFC9 320 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 CDC123O75794 336 aaPredicted RBP18.2■□□□□ 0.5
PNKP-207ENST00000596014 SNUPNO95149 360 aaKnown RBP18.2■□□□□ 0.5
PNKP-207ENST00000596014 CHEK2O96017 543 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 IGHEP01854 428 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 MMP11P24347 488 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 RAB38P57729 211 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 UGT3A2Q3SY77 523 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 MFSD4BQ5TF39 518 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 PPP1R32Q7Z5V6 425 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 NACC2Q96BF6 587 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 MAPKAP1Q9BPZ7 522 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 VN1R1Q9GZP7 353 aa18.2■□□□□ 0.5
PNKP-207ENST00000596014 CACNA1GO43497 2377 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 A0A0A6YYD5 115 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 B4GALT2O60909 372 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 KLK1P06870 262 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 JAK1P23458 1154 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 TRIM42Q8IWZ5 723 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 CHTF18Q8WVB6 975 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 THAP4Q8WY91 577 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 SORT1Q99523 831 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 ILKAPQ9H0C8 392 aaPredicted RBP18.19■□□□□ 0.5
PNKP-207ENST00000596014 TUBB1Q9H4B7 451 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 MANSC1Q9H8J5 431 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 FGFR1OP2Q9NVK5 253 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 ADAM29Q9UKF5 820 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 FBXW2Q9UKT8 454 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.19■□□□□ 0.5
PNKP-207ENST00000596014 RAP2CQ9Y3L5 183 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 PTGDR2Q9Y5Y4 395 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 HS3ST3B1Q9Y662 390 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 MED13Q9UHV7 2174 aa18.19■□□□□ 0.5
PNKP-207ENST00000596014 CYR61O00622 381 aa18.18■□□□□ 0.5
PNKP-207ENST00000596014 TMPRSS11DO60235 418 aa18.18■□□□□ 0.5
PNKP-207ENST00000596014 GBAP04062 536 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms