RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PCDHGB6Q9Y5F9 930 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 TMEM200CA6NKL6 621 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 CFAP99D6REC4 459 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 PPP6CO00743 305 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 PIP5K1BO14986 540 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 SLC16A5O15375 505 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 SGTAO43765 313 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 POP7O75817 140 aaKnown RBP12.16□□□□□ -0.46
SCAF1-202ENST00000595242 ATP1B2P14415 290 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-202ENST00000595242 ST6GAL1P15907 406 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 TSPAN8P19075 237 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 CCR7P32248 378 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 AGTR2P50052 363 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 CASP6P55212 293 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 FOXA1P55317 472 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 DCDP81605 110 aaKnown RBP12.16□□□□□ -0.46
SCAF1-202ENST00000595242 SLC25A3Q00325 362 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 DMPKQ09013 629 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 CUL3Q13618 768 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 GTF2H3Q13889 308 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 NFE2L1Q14494 772 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 LDLRAP1Q5SW96 308 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 SULT1C3Q6IMI6 304 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
SCAF1-202ENST00000595242 C16orf89Q6UX73 402 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 ISLR2Q6UXK2 745 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 GPRIN3Q6ZVF9 776 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 TGIF2LYQ8IUE0 185 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 OR4E2Q8NGC2 313 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 ZFPM2Q8WW38 1151 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 NACC2Q96BF6 587 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 PPP1R36Q96LQ0 422 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 C3orf30Q96M34 536 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 LMF1Q96S06 567 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 INSM2Q96T92 566 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-202ENST00000595242 HGH1Q9BTY7 390 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 THTPAQ9BU02 230 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 LHPPQ9H008 270 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 ENKD1Q9H0I2 346 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 DCLRE1BQ9H816 532 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 SEMA4BQ9NPR2 832 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-202ENST00000595242 PFDN4Q9NQP4 134 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 TMEM45AQ9NWC5 275 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 UTP6Q9NYH9 597 aaKnown RBP12.16□□□□□ -0.46
SCAF1-202ENST00000595242 SEC14L3Q9UDX4 400 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 ADAMTS6Q9UKP5 1117 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 FIS1Q9Y3D6 152 aa12.16□□□□□ -0.46
SCAF1-202ENST00000595242 TAPBPO15533 448 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 CIB2O75838 187 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 KLHL18O94889 574 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 MATN4O95460 622 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 FTH1P02794 183 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 C8GP07360 202 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 ALDOCP09972 364 aaKnown RBP12.15□□□□□ -0.46
SCAF1-202ENST00000595242 LBPP18428 481 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 KLK2P20151 261 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 MMP11P24347 488 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 PRDX3P30048 256 aaKnown RBP12.15□□□□□ -0.46
SCAF1-202ENST00000595242 GCKP35557 465 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 GGT5P36269 586 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 MTTPP55157 894 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 ACTR3P61158 418 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 CSNK1G2P78368 415 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 SRSF11Q05519 484 aaKnown RBP12.15□□□□□ -0.46
SCAF1-202ENST00000595242 RBPJQ06330 500 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 MFAP5Q13361 173 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 KPNB1Q14974 876 aaKnown RBP12.15□□□□□ -0.46
SCAF1-202ENST00000595242 INAQ16352 499 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 PHKG1Q16816 387 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 C6orf163Q5TEZ5 329 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 FAAH2Q6GMR7 532 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 RHBDD2Q6NTF9 364 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 HACD2Q6Y1H2 254 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 GOLGA7Q7Z5G4 137 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 SPATA19Q7Z5L4 167 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 PGAM4Q8N0Y7 254 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 TCAIMQ8N3R3 496 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 WDR60Q8WVS4 1066 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 DLG3Q92796 817 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 RHBDF1Q96CC6 855 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 THOC3Q96J01 351 aaKnown RBP12.15□□□□□ -0.46
SCAF1-202ENST00000595242 TMEM79Q9BSE2 394 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 NDC1Q9BTX1 674 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 KLHL25Q9H0H3 589 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 KIR3DX1Q9H7L2 352 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 AKTIPQ9H8T0 292 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 ASB1Q9Y576 335 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 AP1M2Q9Y6Q5 423 aa12.15□□□□□ -0.46
SCAF1-202ENST00000595242 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.15□□□□□ -0.46
SCAF1-202ENST00000595242 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
SCAF1-202ENST00000595242 LOC100653049A0A140TA62 436 aa12.14□□□□□ -0.47
SCAF1-202ENST00000595242 GSAPA4D1B5 854 aa12.14□□□□□ -0.47
SCAF1-202ENST00000595242 NCF1BA6NI72 391 aaPredicted RBP12.14□□□□□ -0.47
SCAF1-202ENST00000595242 BBIP1A8MTZ0 92 aa12.14□□□□□ -0.47
SCAF1-202ENST00000595242 NCF1CA8MVU1 366 aaPredicted RBP12.14□□□□□ -0.47
SCAF1-202ENST00000595242 PSMD12O00232 456 aaPredicted RBP12.14□□□□□ -0.47
SCAF1-202ENST00000595242 SOCS6O14544 535 aa12.14□□□□□ -0.47
SCAF1-202ENST00000595242 OR7A17O14581 309 aa12.14□□□□□ -0.47
SCAF1-202ENST00000595242 ENTPD5O75356 428 aa12.14□□□□□ -0.47
SCAF1-202ENST00000595242 GPC4O75487 556 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms