RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 UBXN8O00124 270 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 CDC123O75794 336 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SP1P08047 785 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SNRPB2P08579 225 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 GSTM2P28161 218 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SCTRP47872 440 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SLC26A5P58743 744 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SKP1P63208 163 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 LAPTM5Q13571 262 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 HIST2H2ACQ16777 129 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 PAGE2BQ5JRK9 111 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 HIST2H2AA3Q6FI13 130 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SLC25A25Q6KCM7 469 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SLCO4C1Q6ZQN7 724 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 GALNTL5Q7Z4T8 443 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 LCA5Q86VQ0 697 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 ZNF295-AS1Q8N0V1 137 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 ELP5Q8TE02 316 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 UBTD2Q8WUN7 234 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SEC16BQ96JE7 1060 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 SCYL1Q96KG9 808 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 GPR78Q96P69 363 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 NT5DC2Q9H857 520 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 NPIPA1Q9UND3 350 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 ANGPTL3Q9Y5C1 460 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 MYO7BQ6PIF6 2116 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 CSMD2Q7Z408 3487 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 K7EPI3 171 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 NDUFS4O43181 175 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 ASNA1O43681 348 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 GALR3O60755 368 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 CLDN14O95500 239 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 SERPIND1P05546 499 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 FHP07954 510 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 JAK1P23458 1154 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 GCAP28676 217 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 HPDP32754 393 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 ALDH18A1P54886 795 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 OR4D2P58180 307 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 OC90Q02509 493 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 XKR6Q5GH73 641 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 METTL2BQ6P1Q9 378 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 WDR93Q6P2C0 686 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 TMIGD1Q6UXZ0 262 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 ZNF740Q8NDX6 193 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 OR5T3Q8NGG3 340 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 NT5CQ8TCD5 201 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 ACMSDQ8TDX5 336 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 PHF10Q8WUB8 498 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 TSLPQ969D9 159 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 ESAMQ96AP7 390 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 TBC1D20Q96BZ9 403 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 MTFMTQ96DP5 389 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 PTCD3Q96EY7 689 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 EFCAB11Q9BUY7 163 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 RBCK1Q9BYM8 510 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 TSPAN10Q9H1Z9 355 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 EPB41L4BQ9H329 900 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 TRIM45Q9H8W5 580 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 LRFN1Q9P244 771 aa16.43■□□□□ 0.22
SHKBP1-203ENST00000594298 ZNF860A6NHJ4 632 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 KLK8O60259 260 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 SMIM24O75264 130 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 MTHFD2P13995 350 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 EPB42P16452 691 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 SSTR2P30874 369 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 PIK3CGP48736 1102 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 IRF8Q02556 426 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 SLBPQ14493 270 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 SETDB1Q15047 1291 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 CDSNQ15517 529 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 TBCCQ15814 346 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 PFKFB4Q16877 469 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 FBXO48Q5FWF7 155 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 TECRLQ5HYJ1 363 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 EMBQ6PCB8 327 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 ABHD13Q7L211 337 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 RPS19BP1Q86WX3 136 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 CHERPQ8IWX8 916 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 PLD6Q8N2A8 252 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 GHDCQ8N2G8 530 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 UBE2E3Q969T4 207 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 MRPL57Q9BQC6 102 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 CDCP1Q9H5V8 836 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 CPSF2Q9P2I0 782 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 PDZD2O15018 2839 aa16.42■□□□□ 0.22
SHKBP1-203ENST00000594298 ANKDD1BA6NHY2 528 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 C19orf84I3L1E1 186 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 NME2P1O60361 137 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 SLC25A12O75746 678 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 TUBBP07437 444 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 SERPINA6P08185 405 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 ALOX12P18054 663 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 NME2P22392 152 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 CASP2P42575 452 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 ST13P50502 369 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 RIPPLY3P57055 190 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 VSNL1P62760 191 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 PCBP2Q15366 365 aaKnown RBP eCLIP16.41■□□□□ 0.226e-9■■■■■ 40.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms