RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 NCF1P14598 390 aaPredicted RBP22.24■■□□□ 1.15
LSM4-202ENST00000593564 GGT5P36269 586 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 LIM2P55344 173 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 POU4F1Q01851 419 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 CBLBQ13191 982 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 RCN2Q14257 317 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 TMEM211Q6ICI0 200 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 ABHD17CQ6PCB6 329 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 MEX3BQ6ZN04 569 aaKnown RBP22.24■■□□□ 1.15
LSM4-202ENST00000593564 CLNKQ7Z7G1 428 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 CREG2Q8IUH2 290 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 TMEM132CQ8N3T6 1108 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 PSD4Q8NDX1 1056 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 OR52N2Q8NGI0 321 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 TMEM79Q9BSE2 394 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 TP63Q9H3D4 680 aaPredicted RBP22.24■■□□□ 1.15
LSM4-202ENST00000593564 CNOT10Q9H9A5 744 aaKnown RBP22.24■■□□□ 1.15
LSM4-202ENST00000593564 DEPPQ9NTK1 212 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 DNAJC11Q9NVH1 559 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 HPF1Q9NWY4 346 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 TAPBPO15533 448 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 CERS1P27544 350 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 SLC12A2P55011 1212 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 MTTPP55157 894 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 TLE4Q04727 773 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 CDKL4Q5MAI5 379 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 C16orf47Q6ZP98 133 aaPredicted RBP22.23■■□□□ 1.15
LSM4-202ENST00000593564 ASB5Q8WWX0 329 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 ASB15Q8WXK1 588 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 DAZLQ92904 295 aaKnown RBP22.23■■□□□ 1.15
LSM4-202ENST00000593564 WDR34Q96EX3 536 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 CSF3RQ99062 836 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 TRIM31Q9BZY9 425 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 MCCC2Q9HCC0 563 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 WWOXQ9NZC7 414 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 MYOTQ9UBF9 498 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 CLCA3PQ9Y6N3 262 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 C2CD3Q4AC94 2353 aa22.23■■□□□ 1.15
LSM4-202ENST00000593564 USP27XA6NNY8 438 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 CLGNO14967 610 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 PRAMEF4O60810 478 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 CTNSO60931 367 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 BMPR2Q13873 1038 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 EFTUD2Q15029 972 aaKnown RBP eCLIP22.22■■□□□ 1.152e-11■■■■■ 29.6
LSM4-202ENST00000593564 XKR6Q5GH73 641 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 PRAMEF9Q5VWM5 478 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 CEP128Q6ZU80 1094 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 MORN4Q8NDC4 146 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 PTCD3Q96EY7 689 aaKnown RBP22.22■■□□□ 1.15
LSM4-202ENST00000593564 COPS7BQ9H9Q2 264 aaPredicted RBP22.22■■□□□ 1.15
LSM4-202ENST00000593564 LIN28AQ9H9Z2 209 aaKnown RBP22.22■■□□□ 1.15
LSM4-202ENST00000593564 SMYD2Q9NRG4 433 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 VTI1BQ9UEU0 232 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 ITGB1BP2Q9UKP3 347 aa22.22■■□□□ 1.15
LSM4-202ENST00000593564 ZNF490Q9ULM2 529 aaPredicted RBP22.22■■□□□ 1.15
LSM4-202ENST00000593564 PINLYPA6NC86 204 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 PDE9AO76083 593 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 OR6B1O95007 311 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 IFNA16P05015 189 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 IGFBP2P18065 325 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 RIPPLY3P57055 190 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 TGM3Q08188 693 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 SULT1C3Q6IMI6 304 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 ADNP2Q6IQ32 1131 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 PAOXQ6QHF9 649 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 HSDL2Q6YN16 418 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 GPSM1Q86YR5 675 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 ZBED8Q8IZ13 594 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 SPATA6LQ8N4H0 392 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 OR2M7Q8NG81 312 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 OR14A16Q8NHC5 309 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 PTPMT1Q8WUK0 201 aaPredicted RBP22.21■■□□□ 1.15
LSM4-202ENST00000593564 KIAA1191Q96A73 305 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 TSPAN17Q96FV3 270 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 RASL10BQ96S79 203 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 EFCAB11Q9BUY7 163 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 CAB39LQ9H9S4 337 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 PRDM7Q9NQW5 492 aa22.21■■□□□ 1.15
LSM4-202ENST00000593564 MTO1Q9Y2Z2 717 aaKnown RBP22.21■■□□□ 1.15
LSM4-202ENST00000593564 EFCAB8A8MWE9 144 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 CCDC188H7C350 402 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 ACOT7O00154 380 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 FANCGO15287 622 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 STK16O75716 305 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 CHRNB4P30926 498 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 SOX3P41225 446 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 HSPA7P48741 367 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 PPIAP62937 165 aaKnown RBP22.2■■□□□ 1.14
LSM4-202ENST00000593564 DOC2AQ14183 400 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 PDK4Q16654 411 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 IL20RBQ6UXL0 311 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 RGS9BPQ6ZS82 235 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 SNX31Q8N9S9 440 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 LILRB4Q8NHJ6 448 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 RND1Q92730 232 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 ALOXE3Q9BYJ1 711 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 ROGDIQ9GZN7 287 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 DEFB127Q9H1M4 99 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 ZDHHC11Q9H8X9 412 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 LYRM4Q9HD34 91 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms