RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 PNO1Q9NRX1 252 aaKnown RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 GRHL1Q9NZI5 618 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 NUDT4Q9NZJ9 180 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 CD274Q9NZQ7 290 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 PTBP2Q9UKA9 531 aaKnown RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 RNF112Q9ULX5 631 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 YARS2Q9Y2Z4 477 aaKnown RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 A0A0G2JN53 185 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 CCDC189A1A4V9 331 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 E9PLN8 166 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 CYR61O00622 381 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 TFECO14948 347 aaPredicted RBP12.37□□□□□ -0.43
APOC1-209ENST00000592885 FANCGO15287 622 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 RAD51CO43502 376 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 CTNSO60931 367 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 WISP2O76076 250 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 ZFAND5O76080 213 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 SCELO95171 688 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 CLDN14O95500 239 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 C1QAP02745 245 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 PRF1P14222 555 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 COX6B1P14854 86 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 CERS1P27544 350 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 GRNP28799 593 aaKnown RBP12.37□□□□□ -0.43
APOC1-209ENST00000592885 CASP2P42575 452 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 SSR4P51571 173 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 PLA2G16P53816 162 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 LIM2P55344 173 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 PCDH1Q08174 1060 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 SERTAD2Q14140 314 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 DOC2AQ14183 400 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 OR4D1Q15615 310 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 TMEM35AQ53FP2 167 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 C3orf62Q6ZUJ4 267 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 CHERPQ8IWX8 916 aaKnown RBP12.37□□□□□ -0.43
APOC1-209ENST00000592885 ZFP62Q8NB50 900 aaPredicted RBP12.37□□□□□ -0.43
APOC1-209ENST00000592885 MORN4Q8NDC4 146 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 C16orf52Q8NHV5 167 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 STAG3L4Q8TBR4 150 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 UBTD2Q8WUN7 234 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 VKORC1Q9BQB6 163 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 TBCDQ9BTW9 1192 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 RAB17Q9H0T7 212 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 NMRAL1Q9HBL8 299 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 TIMMDC1Q9NPL8 285 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 ZNF223Q9UK11 482 aaPredicted RBP12.37□□□□□ -0.43
APOC1-209ENST00000592885 FBXW2Q9UKT8 454 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 ZNF490Q9ULM2 529 aaPredicted RBP12.37□□□□□ -0.43
APOC1-209ENST00000592885 PYCARDQ9ULZ3 195 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 UTP11Q9Y3A2 253 aaKnown RBP12.37□□□□□ -0.43
APOC1-209ENST00000592885 SPACA6W5XKT8 324 aa12.37□□□□□ -0.43
APOC1-209ENST00000592885 TGFBR3LH3BV60 316 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 PEX1O43933 1283 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 CCNT2O60583 730 aaKnown RBP12.36□□□□□ -0.43
APOC1-209ENST00000592885 PRAMEF4O60810 478 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 KERAO60938 352 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 PIAS1O75925 651 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 TUBB4AP04350 444 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 CD22P20273 847 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 CRABP2P29373 138 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 ST13P50502 369 aaKnown RBP12.36□□□□□ -0.43
APOC1-209ENST00000592885 HNRNPFP52597 415 aaKnown RBP12.36□□□□□ -0.43
APOC1-209ENST00000592885 GPX6P59796 221 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 IRF8Q02556 426 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 CHIT1Q13231 466 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 RNFT1Q5M7Z0 435 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 PRAMEF9Q5VWM5 478 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 TBC1D1Q86TI0 1168 aaPredicted RBP12.36□□□□□ -0.43
APOC1-209ENST00000592885 SULF2Q8IWU5 870 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 CTAGE3PQ8IX95 158 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 SPATA6LQ8N4H0 392 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 TMEM52Q8NDY8 209 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 OR8K3Q8NH51 312 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 AGAP11Q8TF27 550 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 DMRTA2Q96SC8 542 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 MS4A8Q9BY19 250 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 CD244Q9BZW8 370 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 PRDM7Q9NQW5 492 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
APOC1-209ENST00000592885 VTI1BQ9UEU0 232 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 ADGRE2Q9UHX3 823 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 ASB1Q9Y576 335 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 CLCA3PQ9Y6N3 262 aa12.36□□□□□ -0.43
APOC1-209ENST00000592885 SYCE1LA8MT33 242 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 A8MVJ9 347 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 SLC35E2BP0CK96 405 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 EPORP19235 508 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 ARFIP1P53367 373 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 STX4Q12846 297 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 BIKQ13323 160 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 SLMAPQ14BN4 828 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 KBTBD12Q3ZCT8 623 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 HSDL2Q6YN16 418 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 RGS9BPQ6ZS82 235 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 DOLPP1Q86YN1 238 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 SRRM1Q8IYB3 904 aaKnown RBP12.35□□□□□ -0.43
APOC1-209ENST00000592885 LAS2Q8IYD9 372 aa12.35□□□□□ -0.43
APOC1-209ENST00000592885 PSD4Q8NDX1 1056 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms