RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CROCCQ5TZA2 2017 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 TRBV11-1A0A0K0K1C0 115 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 CCDC189A1A4V9 331 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 A1L4Q6 167 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 SAP18O00422 153 aaKnown RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 CLDN4O14493 209 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 MYO1DO94832 1006 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 TUBB4AP04350 444 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 MST1P26927 711 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 TPP2P29144 1249 aaPredicted RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 MAGEA12P43365 314 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 ALDH18A1P54886 795 aaKnown RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 KCNK10P57789 538 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 OC90Q02509 493 aaPredicted RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 SLC13A2Q13183 592 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 DDX39BQ13838 428 aaKnown RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 PCBP2Q15366 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
APOC1-208ENST00000592535 TECRLQ5HYJ1 363 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 ZNF468Q5VIY5 522 aaPredicted RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 SPINK14Q6IE38 97 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 KLC3Q6P597 504 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 MYLK4Q86YV6 388 aaPredicted RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 ZNF595Q8IYB9 648 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 APCDD1LQ8NCL9 501 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 B3GNT7Q8NFL0 401 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 ISL2Q96A47 359 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 SCMH1Q96GD3 660 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 KCNC2Q96PR1 638 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 TBCDQ9BTW9 1192 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 ROGDIQ9GZN7 287 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 OR51B5Q9H339 312 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 KLHL1Q9NR64 748 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 KCMF1Q9P0J7 381 aa12.97□□□□□ -0.33
APOC1-208ENST00000592535 ZNF223Q9UK11 482 aaPredicted RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 MRPS33Q9Y291 106 aaKnown RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 DIDO1Q9BTC0 2240 aaKnown RBP12.97□□□□□ -0.33
APOC1-208ENST00000592535 MYOCOSA0A1B0GUC4 107 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 NEURL1O76050 574 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 SIX3O95343 332 aaPredicted RBP12.96□□□□□ -0.33
APOC1-208ENST00000592535 CRYABP02511 175 aaKnown RBP12.96□□□□□ -0.33
APOC1-208ENST00000592535 ATP5A1P25705 553 aaKnown RBP12.96□□□□□ -0.33
APOC1-208ENST00000592535 SERPINB9P50453 376 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 CLCN2P51788 898 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 MLF1P58340 268 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 GTF2H2Q13888 395 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 TERF2Q15554 542 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 C4orf17Q53FE4 359 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 TMEM35AQ53FP2 167 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 KHDRBS2Q5VWX1 349 aaKnown RBP12.96□□□□□ -0.33
APOC1-208ENST00000592535 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 CHSY3Q70JA7 882 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 GOLGA7Q7Z5G4 137 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 ACOT4Q8N9L9 421 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 DNAJB8Q8NHS0 232 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 HUS1BQ8NHY5 278 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 KIF18AQ8NI77 898 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 DCAKDQ8WVC6 231 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 CMTM7Q96FZ5 175 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 MAPKAP1Q9BPZ7 522 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 SORBS1Q9BX66 1292 aaKnown RBP12.96□□□□□ -0.33
APOC1-208ENST00000592535 DEFB126Q9BYW3 111 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 ACTR8Q9H981 624 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 LYRM4Q9HD34 91 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 ADAP2Q9NPF8 381 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 LRFN1Q9P244 771 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 NFU1Q9UMS0 254 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 IKBKGQ9Y6K9 419 aa12.96□□□□□ -0.33
APOC1-208ENST00000592535 A0A087WUV0 522 aaPredicted RBP12.95□□□□□ -0.34
APOC1-208ENST00000592535 TRIM49D1C9J1S8 452 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 LRRTM2O43300 516 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 CTNSO60931 367 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 WISP2O76076 250 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 SCELO95171 688 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 UNC5CO95185 931 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 SP1P08047 785 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 CD46P15529 392 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 HIST1H1TP22492 207 aaPredicted RBP12.95□□□□□ -0.34
APOC1-208ENST00000592535 EEF1DP29692 281 aaKnown RBP12.95□□□□□ -0.34
APOC1-208ENST00000592535 SERPINB1P30740 379 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 SSR2P43308 183 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 GPR143P51810 404 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 RCN2Q14257 317 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 AP5B1Q2VPB7 878 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 DEPDC1Q5TB30 811 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 LIPJQ5W064 366 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 SLC25A25Q6KCM7 469 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 GFRALQ6UXV0 394 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 TAOK1Q7L7X3 1001 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 GALNTL5Q7Z4T8 443 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 ZNF227Q86WZ6 799 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 ARMC10Q8N2F6 343 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 CEP112Q8N8E3 955 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 PTGR2Q8N8N7 351 aaPredicted RBP12.95□□□□□ -0.34
APOC1-208ENST00000592535 TMEM178AQ8NBL3 297 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 THAP3Q8WTV1 239 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms