RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 EMP2P54851 167 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 IL2P60568 153 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 KLF10Q13118 480 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 MRPL49Q13405 166 aaKnown RBP16.48■□□□□ 0.23
CIRBP-235ENST00000591935 HERC3Q15034 1050 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 CRB2Q5IJ48 1285 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 ATG9BQ674R7 924 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 MBOAT1Q6ZNC8 495 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 NDUFAF7Q7L592 441 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 CUZD1Q86UP6 607 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 HOMEZQ8IX15 550 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 SHISA5Q8N114 240 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 AMER2Q8N7J2 671 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 AMER3Q8N944 861 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 CEP70Q8NHQ1 597 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 SSC4DQ8WTU2 575 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 THAP11Q96EK4 314 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 MMABQ96EY8 250 aaPredicted RBP16.48■□□□□ 0.23
CIRBP-235ENST00000591935 THOC3Q96J01 351 aaKnown RBP16.48■□□□□ 0.23
CIRBP-235ENST00000591935 LMF1Q96S06 567 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 TGIF2Q9GZN2 237 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 TMEM184CQ9NVA4 438 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 ASF1BQ9NVP2 202 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 SH2B3Q9UQQ2 575 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 PCDHGA10Q9Y5H3 936 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 SCN2AQ99250 2005 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 ICE1Q9Y2F5 2266 aa16.48■□□□□ 0.23
CIRBP-235ENST00000591935 A0A0A6YYC8 382 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 I3L1I5 382 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 DDAH2O95865 285 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 HIST1H2AGP0C0S8 130 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 MTHFD2P13995 350 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 NCF2P19878 526 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 HIST1H2ADP20671 130 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 AVPR1BP47901 424 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 RPS15AP62244 130 aaKnown RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 AP2B1P63010 937 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 IRX1P78414 480 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 SP140Q13342 867 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 ELOAQ14241 798 aaKnown RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 OR4D1Q15615 310 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 SYT16Q17RD7 645 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 ZXDCQ2QGD7 858 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 EIF2S3LQ2VIR3 472 aaKnown RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 LSM12Q3MHD2 195 aaKnown RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 ISLR2Q6UXK2 745 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 KBTBD2Q8IY47 623 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 MYO1HQ8N1T3 1032 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 DNAJB14Q8TBM8 379 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 HIST1H2AHQ96KK5 128 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 HIST1H2AJQ99878 128 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 MACROD1Q9BQ69 325 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 H2AFJQ9BTM1 129 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 UNKQ9C0B0 810 aaKnown RBP16.47■□□□□ 0.23
CIRBP-235ENST00000591935 ATG10Q9H0Y0 220 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 ZNF385DQ9H6B1 395 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 MEAF6Q9HAF1 191 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 PARVBQ9HBI1 364 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 NTNG1Q9Y2I2 539 aa16.47■□□□□ 0.23
CIRBP-235ENST00000591935 KCNE1BA0A087WTH5 132 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 NSG1A0A0A6YYJ2 146 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 A0A1W2PQ72 361 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 PABPN1LA6NDY0 278 aaKnown RBP16.46■□□□□ 0.23
CIRBP-235ENST00000591935 IDSB3KWA1 339 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 SDHDO14521 159 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 SEMA7AO75326 666 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 SUPT7LO94864 414 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 HEXBP07686 556 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 PGM1P36871 562 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 EFNA3P52797 238 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 TBPL1P62380 186 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 CDC16Q13042 620 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 TLR1Q15399 786 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 NR6A1Q15406 480 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 ZRSR2Q15696 482 aaKnown RBP16.46■□□□□ 0.23
CIRBP-235ENST00000591935 PHKG1Q16816 387 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 B3GNTL1Q67FW5 361 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-235ENST00000591935 CLYBLQ8N0X4 340 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 PTGR2Q8N8N7 351 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-235ENST00000591935 RBM15BQ8NDT2 890 aaKnown RBP16.46■□□□□ 0.23
CIRBP-235ENST00000591935 PRR7Q8TB68 274 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 PHF21BQ96EK2 531 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 LINGO1Q96FE5 620 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 OR52B2Q96RD2 323 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 BARD1Q99728 777 aaKnown RBP16.46■□□□□ 0.23
CIRBP-235ENST00000591935 NUF2Q9BZD4 464 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 ZNF160Q9HCG1 818 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 RNF112Q9ULX5 631 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 TRAF6Q9Y4K3 522 aa16.46■□□□□ 0.23
CIRBP-235ENST00000591935 H0YIG0 161 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 KLHL18O94889 574 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 TSPAN12O95859 305 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 CYC1P08574 325 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 COX4I1P13073 169 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 ICAM2P13598 275 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 GRK3P35626 688 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 TSFMP43897 325 aaKnown RBP16.45■□□□□ 0.22
CIRBP-235ENST00000591935 CSNK1G2P78368 415 aa16.45■□□□□ 0.22
CIRBP-235ENST00000591935 MAT1AQ00266 395 aaKnown RBP16.45■□□□□ 0.22
CIRBP-235ENST00000591935 MFAP5Q13361 173 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms