RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 NTMT1Q9BV86 223 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 ERVK-6Q9BXR3 956 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 ROPN1BQ9BZX4 212 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-227ENST00000591849 AICDAQ9GZX7 198 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.47□□□□□ -0.89
BRCA1-227ENST00000591849 ROPN1Q9HAT0 212 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-227ENST00000591849 DMRT3Q9NQL9 472 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 PRDM7Q9NQW5 492 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 NMRK1Q9NWW6 199 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 LUZP4Q9P127 313 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 MID2Q9UJV3 735 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 STK38LQ9Y2H1 464 aa9.47□□□□□ -0.89
BRCA1-227ENST00000591849 MDC1Q14676 2089 aaKnown RBP9.46□□□□□ -0.89
BRCA1-227ENST00000591849 CCDC151A5D8V7 595 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 FOXO6A8MYZ6 492 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 PYCARD-AS1I3L0S3 204 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 FOXE1O00358 373 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 CRCPO75575 148 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 WISP1O95388 367 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 MLYCDO95822 493 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 CELA2AP08217 269 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 RPS17P08708 135 aaKnown RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 ITGAMP11215 1152 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 CPA3P15088 417 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 IMPDH1P20839 514 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 HIST1H1TP22492 207 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 ATP5A1P25705 553 aaKnown RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 HMOX2P30519 316 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 CRHR1P34998 444 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 PRKAA2P54646 552 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 MLLT10P55197 1068 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 LIM2P55344 173 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 HSD17B7P56937 341 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF33BQ06732 778 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 SLAMF1Q13291 335 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 MFAP5Q13361 173 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 E2F2Q14209 437 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 RASA2Q15283 850 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 UNC50Q53HI1 259 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF678Q5SXM1 525 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 C10orf62Q5T681 223 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 FRG2Q64ET8 278 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 SLC6A19Q695T7 634 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 PLAG1Q6DJT9 500 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 IGFL3Q6UXB1 125 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 GPRIN3Q6ZVF9 776 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 RPS27LQ71UM5 84 aaKnown RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 UBE3DQ7Z6J8 389 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 CLNKQ7Z7G1 428 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 ATCAYQ86WG3 371 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 IQCKQ8N0W5 287 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 SHISA5Q8N114 240 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 C4orf33Q8N1A6 199 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 RBMXL3Q8N7X1 1067 aaKnown RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 M1APQ8TC57 530 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 AENQ8WTP8 325 aaKnown RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 SELENOMQ8WWX9 145 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 CAVIN3Q969G5 261 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 PNPLA2Q96AD5 504 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 IMMP1LQ96LU5 166 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF354BQ96LW1 612 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 FRG2BQ96QU4 278 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 MAPKAP1Q9BPZ7 522 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 WDR77Q9BQA1 342 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-227ENST00000591849 EPN3Q9H201 632 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 WDR41Q9HAD4 459 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 LYRM4Q9HD34 91 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 NECTIN3Q9NQS3 549 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 MS4A12Q9NXJ0 267 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 STMN3Q9NZ72 180 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 PHF11Q9UIL8 331 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 DAPP1Q9UN19 280 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 PLAAQ9Y263 795 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 B3GNT3Q9Y2A9 372 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 TSC22D4Q9Y3Q8 395 aa9.46□□□□□ -0.9
BRCA1-227ENST00000591849 NBASA2RRP1 2371 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SCN3AQ9NY46 2000 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 MYOCOSA0A1B0GUC4 107 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 A0A1W2PQ72 361 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 BLACEA4D250 179 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SYNDIG1LA6NDD5 238 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 DYRK3O43781 588 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 CTNSO60931 367 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 OR4F21O95013 312 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 TBX6O95947 436 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-227ENST00000591849 KRT6AP02538 564 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 KRT6BP04259 564 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 NUDT17P0C025 328 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SBK3P0C264 359 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 DEKP35659 375 aaKnown RBP9.45□□□□□ -0.9
BRCA1-227ENST00000591849 TSFMP43897 325 aaKnown RBP9.45□□□□□ -0.9
BRCA1-227ENST00000591849 KRT6CP48668 564 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 EFNA3P52797 238 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SLC26A5P58743 744 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 NAA20P61599 178 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 ASPHQ12797 758 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 TRAF3Q13114 568 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 CUL3Q13618 768 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 PLEKHN1Q494U1 663 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-227ENST00000591849 B3GNTL1Q67FW5 361 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms