RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CORO1CQ9ULV4 474 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-226ENST00000591534 NPIPA1Q9UND3 350 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 ZNF835Q9Y2P0 537 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 MEMO1Q9Y316 297 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 DHRS7Q9Y394 339 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 ACTL7BQ9Y614 415 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 SLC22A7Q9Y694 548 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 CCDC88CQ9P219 2028 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 DIDO1Q9BTC0 2240 aaKnown RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CNTRLQ7Z7A1 2325 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 NUP210LQ5VU65 1888 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 IGHV3-20A0A0C4DH32 117 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ASPDHA6ND91 283 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 URADA6NGE7 173 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 GABRR3A8MPY1 467 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 MAGEB17A8MXT2 336 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 E9PLN8 166 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SGK494L7N484 410 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 FCHO1O14526 889 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SLC16A5O15375 505 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 P2RX6O15547 441 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ASNA1O43681 348 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ACSL3O95573 720 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SP1P08047 785 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ZNF24P17028 368 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 IL1RNP18510 177 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 POU3F2P20265 443 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 IMPA1P29218 277 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ELK3P41970 407 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CYB561P49447 251 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 OR4D2P58180 307 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 MRPS25P82663 173 aaKnown RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 MPP1Q00013 466 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 MGAT5Q09328 741 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SP140Q13342 867 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ABRAXAS2Q15018 415 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 KRT71Q3SY84 523 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SFT2D3Q587I9 215 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 WIPI1Q5MNZ9 446 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 AGBL2Q5U5Z8 902 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 STEAP4Q687X5 459 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SLC25A25Q6KCM7 469 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CAPN13Q6MZZ7 669 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 PAPD4Q6PIY7 484 aaKnown RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 GALNT7Q86SF2 657 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CRLF3Q8IUI8 442 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 PLD3Q8IV08 490 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CEP97Q8IW35 865 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 MDS2Q8NDY4 140 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CA5BP1Q8WTZ4 195 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 PHF10Q8WUB8 498 aaKnown RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ZNF669Q96BR6 464 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 C14orf79Q96F83 325 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SCMH1Q96GD3 660 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 SIGLEC10Q96LC7 697 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 PWWP2AQ96N64 755 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 OLFM1Q99784 485 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CPNE1Q99829 537 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 VKORC1Q9BQB6 163 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 TRIM54Q9BYV2 358 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CLK4Q9HAZ1 481 aaKnown RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 PARVBQ9HBI1 364 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 HCN3Q9P1Z3 774 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 LRFN1Q9P244 771 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 TRMT6Q9UJA5 497 aaKnown RBP8.86□□□□□ -0.99
BRCA1-226ENST00000591534 TINAGQ9UJW2 476 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 ITGB1BP2Q9UKP3 347 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CORINQ9Y5Q5 1042 aa8.86□□□□□ -0.99
BRCA1-226ENST00000591534 CROCCQ5TZA2 2017 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 ZCWPW2A0A1B0GU75 182 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 CCDC189A1A4V9 331 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 FOXO6A8MYZ6 492 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 KLRC4-KLRK1H3BQV0 150 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 SLC25A12O75746 678 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 FAM153BP0C7A2 387 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 SPRP35270 261 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 CCR8P51685 355 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 TBPL1P62380 186 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 PMP22Q01453 160 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 RGS1Q08116 209 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 USP10Q14694 798 aaKnown RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 MAPKAPK3Q16644 382 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 FAM153CQ494X1 144 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 CEP85LQ5SZL2 805 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 FCRLBQ6BAA4 426 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 TMEM211Q6ICI0 200 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 SPINK14Q6IE38 97 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 LANCL3Q6ZV70 420 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 ABHD13Q7L211 337 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 GALNTL5Q7Z4T8 443 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 VN1R4Q7Z5H5 301 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 RPS19BP1Q86WX3 136 aaKnown RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 IGDCC3Q8IVU1 814 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 DENND6AQ8IWF6 608 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 LRRC56Q8IYG6 542 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 MYO1HQ8N1T3 1032 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 ZCCHC10Q8TBK6 192 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 ADAMTS18Q8TE60 1221 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 ATL1Q8WXF7 558 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 TBC1D20Q96BZ9 403 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms