RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ATG4BQ9Y4P1 393 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 A0A096LPI6 279 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 B3GALT2O43825 422 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 ERN1O75460 977 aaKnown RBP16.53■□□□□ 0.24
CXXC1-212ENST00000589940 LDOC1O95751 146 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-212ENST00000589940 CKMT2P17540 419 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 ALDH9A1P49189 494 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 SLC7A2P52569 658 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 LRRC74AQ0VAA2 488 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 CLPPQ16740 277 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-212ENST00000589940 TMTC4Q5T4D3 741 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 KIAA2013Q8IYS2 634 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 DNAJB14Q8TBM8 379 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 RHBDD1Q8TEB9 315 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 CGREF1Q99674 301 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 SYNDIG1Q9H7V2 258 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 EHD3Q9NZN3 535 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 ABCD2Q9UBJ2 740 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 SLC7A8Q9UHI5 535 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 BTNL2Q9UIR0 455 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 SPEGQ15772 3267 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 RALGAPA1Q6GYQ0 2036 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 A0A1W2PR48 441 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 RNASET2O00584 256 aaKnown RBP16.52■□□□□ 0.24
CXXC1-212ENST00000589940 RFXANKO14593 260 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 GALR3O60755 368 aaPredicted RBP16.52■□□□□ 0.24
CXXC1-212ENST00000589940 PDE5AO76074 875 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 ANKRD34CP0C6C1 535 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 MSL3P1P0C860 447 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 IL1RNP18510 177 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 HNRNPFP52597 415 aaKnown RBP16.52■□□□□ 0.24
CXXC1-212ENST00000589940 PIGGQ5H8A4 983 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 LRIF1Q5T3J3 769 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 PDSS2Q86YH6 399 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 EFCAB3Q8N7B9 438 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 FAM47BQ8NA70 645 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 FAM13CQ8NE31 585 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 MIEF2Q96C03 454 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 CCDC115Q96NT0 180 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 MAPKAP1Q9BPZ7 522 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 INPP5KQ9BT40 448 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 EDEM2Q9BV94 578 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 PAIP1Q9H074 479 aaKnown RBP16.52■□□□□ 0.24
CXXC1-212ENST00000589940 ENAMQ9NRM1 1142 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 IRAK4Q9NWZ3 460 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 NAALAD2Q9Y3Q0 740 aa16.52■□□□□ 0.24
CXXC1-212ENST00000589940 C15orf38-AP3S2A0A0A6YYH1 394 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 FITM1A5D6W6 292 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PROM1O43490 865 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 TRPC1P48995 793 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 SPEM2Q0P670 501 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 NDUFA9Q16795 377 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 MPEG1Q2M385 716 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 MUM1Q2TAK8 710 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 GARNL3Q5VVW2 1013 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 NANOGP8Q6NSW7 305 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 DNAJC14Q6Y2X3 702 aaPredicted RBP16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PRSS41Q7RTY9 318 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 ARPINQ7Z6K5 226 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 NATD1Q8N6N6 113 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PANX1Q96RD7 426 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 NANOGQ9H9S0 305 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 ANKHQ9HCJ1 492 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 SEMA4GQ9NTN9 838 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 TAS2R7Q9NYW3 318 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 VAPAQ9P0L0 249 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 FTSJ1Q9UET6 329 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PHF11Q9UIL8 331 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 NEUROG3Q9Y4Z2 214 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PCDHA9Q9Y5H5 950 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 C1orf226A1L170 272 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 AIFM1O95831 613 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 GP1BAP07359 652 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PTPN6P29350 595 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 CEACAM7Q14002 265 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PRSS53Q2L4Q9 553 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 SAMD4BQ5PRF9 694 aaKnown RBP16.51■□□□□ 0.23
CXXC1-212ENST00000589940 ARHGAP22Q7Z5H3 698 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 HPS6Q86YV9 775 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 SLC15A3Q8IY34 581 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 CLECL1Q8IZS7 167 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 CIDECQ96AQ7 238 aaPredicted RBP16.51■□□□□ 0.23
CXXC1-212ENST00000589940 C10orf90Q96M02 699 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 GFM1Q96RP9 751 aaKnown RBP16.51■□□□□ 0.23
CXXC1-212ENST00000589940 LYRM4Q9HD34 91 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 TMEM9BQ9NQ34 198 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 KCMF1Q9P0J7 381 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 PACSIN3Q9UKS6 424 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 DAPP1Q9UN19 280 aa16.51■□□□□ 0.23
CXXC1-212ENST00000589940 TRBV5-3A0A0A0MS03 114 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 IGHV5-10-1A0A0J9YXX1 117 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 HYKKA2RU49 373 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 TMEM150CB9EJG8 249 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 CD59P13987 128 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 HOXB9P17482 250 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 ACP1P24666 158 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 CDKN2CP42773 168 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 LIM2P55344 173 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 ELF3P78545 371 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 RUNX2Q13950 521 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms