RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PHF11Q9UIL8 331 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 FBXW2Q9UKT8 454 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 ACSL6Q9UKU0 697 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 PADI1Q9ULC6 663 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 ASB4Q9Y574 426 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 SPACA6W5XKT8 324 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 SPTBP11277 2137 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 SCN3AQ9NY46 2000 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 E9PBE3 544 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 UBDO15205 165 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 KLHL41O60662 606 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 RAD1O60671 282 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 GUCY1B2O75343 617 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 ALDOCP09972 364 aaKnown RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 BCKDHAP12694 445 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 RNH1P13489 461 aaKnown RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 SDC1P18827 310 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 CPN2P22792 545 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 XCR1P46094 333 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 GSTM5P46439 218 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 HNRNPH2P55795 449 aaKnown RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 SHC2P98077 582 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 LCN10Q6JVE6 187 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 FAM199XQ6PEV8 388 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF517Q6ZMY9 492 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 CDC26Q8NHZ8 85 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 ADAMTS18Q8TE60 1221 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 C16orf78Q8WTQ4 265 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 C10orf82Q8WW14 230 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 FKBP10Q96AY3 582 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 TM4SF18Q96CE8 201 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 PEX11GQ96HA9 241 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF578Q96N58 590 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 CCT8L2Q96SF2 557 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 CHST8Q9H2A9 424 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 MKKSQ9NPJ1 570 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 MS4A12Q9NXJ0 267 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 KCMF1Q9P0J7 381 aa14.34□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF282Q9UDV7 671 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 GPN3Q9UHW5 284 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-211ENST00000589753 C9J4A7 227 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 PSMD12O00232 456 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-211ENST00000589753 PROM1O43490 865 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 SNX3O60493 162 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 FAM107AO95990 144 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 ALBP02768 609 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 G6PDP11413 515 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 IL10P22301 178 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TACR1P25103 407 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TLX1P31314 330 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-211ENST00000589753 BUD31P41223 144 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-211ENST00000589753 DIO3P55073 304 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TAS2R50P59544 299 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TNFRSF17Q02223 184 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 OCA2Q04671 838 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 MLIPQ5VWP3 458 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TMEM198Q66K66 360 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 FAM198BQ6UWH4 519 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 OVCH1Q7RTY7 1134 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 SHISA5Q8N114 240 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TMEM132CQ8N3T6 1108 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 FAM47BQ8NA70 645 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TSSK3Q96PN8 268 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 OR1F2PQ96R84 312 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 MYNNQ9NPC7 610 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 AIG1Q9NVV5 245 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TEX10Q9NXF1 929 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-211ENST00000589753 CTSFQ9UBX1 484 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 BAIAP2L1Q9UHR4 511 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 G3BP2Q9UN86 482 aaKnown RBP14.33□□□□□ -0.12
ATG4D-211ENST00000589753 TRIM33Q9UPN9 1127 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 WBP11Q9Y2W2 641 aaKnown RBP14.33□□□□□ -0.12
ATG4D-211ENST00000589753 ATG4BQ9Y4P1 393 aa14.33□□□□□ -0.12
ATG4D-211ENST00000589753 IGLV3-12A0A075B6K2 115 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 A0A1W2PR48 441 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 FAM227AF5H4B4 570 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 CYR61O00622 381 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 AIFM1O95831 613 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 FHP07954 510 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 IL3P08700 152 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 NR2F6P10588 404 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 IDO1P14902 403 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 ASMTP46597 345 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 KLC1Q07866 573 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 PTGR1Q14914 329 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 GSTA3Q16772 222 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 TBC1D25Q3MII6 688 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 NDUFAF5Q5TEU4 345 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 METTL21CQ5VZV1 264 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 C18orf63Q68DL7 685 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 MRPL14Q6P1L8 145 aaKnown RBP14.32□□□□□ -0.12
ATG4D-211ENST00000589753 RIPOR1Q6ZS17 1223 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 IKBIPQ70UQ0 350 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 PIGWQ7Z7B1 504 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 ZC3H7AQ8IWR0 971 aaKnown RBP14.32□□□□□ -0.12
ATG4D-211ENST00000589753 CACNA2D3Q8IZS8 1091 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 FAM9CQ8IZT9 166 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 CLHC1Q8NHS4 586 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms