RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 FAM180AQ6UWF9 173 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 ZNF793Q6ZN11 406 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 RPS27LQ71UM5 84 aaKnown RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 TRMT10CQ7L0Y3 403 aaKnown RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 UBE3DQ7Z6J8 389 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 ZNF473Q8WTR7 871 aaKnown RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 UBLCP1Q8WVY7 318 aaPredicted RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 HAS2Q92819 552 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 CMTM7Q96FZ5 175 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 SEC16BQ96JE7 1060 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 MAPKAP1Q9BPZ7 522 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 NPLQ9BXD5 320 aaPredicted RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 NOL11Q9H8H0 719 aaKnown RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 CLK4Q9HAZ1 481 aaKnown RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 MMP25Q9NPA2 562 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 ABI3Q9P2A4 366 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 COPG2Q9UBF2 871 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 TBK1Q9UHD2 729 aa8.29□□□□□ -1.08
SDF2-207ENST00000588472 MRPS33Q9Y291 106 aaKnown RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 TNPO3Q9Y5L0 923 aaKnown RBP8.29□□□□□ -1.08
SDF2-207ENST00000588472 TRAV17A0A0B4J275 112 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TRBV11-1A0A0K0K1C0 115 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TCRBV16S1A1N1A0A5B0 115 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 SAGE2PA6NJ88 616 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 SMIM23A6NLE4 172 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 FOXO6A8MYZ6 492 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 CYR61O00622 381 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 E2F3O00716 465 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 OR7A17O14581 309 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 PRAMEF2O60811 474 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 LDB3O75112 727 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 SEMA7AO75326 666 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 CLDN9O95484 217 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 CBX6O95503 412 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 GBAP04062 536 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 MYBL2P10244 700 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 HIST1H1TP22492 207 aaPredicted RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 CPN2P22792 545 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 ATP5A1P25705 553 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 GCAP28676 217 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 CD96P40200 585 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 MAGEA12P43365 314 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TSFMP43897 325 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 PHEXP78562 749 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 PMP22Q01453 160 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 STX4Q12846 297 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TUBA3CQ13748 450 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 PCBP2Q15366 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
SDF2-207ENST00000588472 ZRSR2Q15696 482 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 ADPRMQ3LIE5 342 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TMEM35AQ53FP2 167 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 DEPDC1Q5TB30 811 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 KHDRBS2Q5VWX1 349 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 LIPJQ5W064 366 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 SPINK14Q6IE38 97 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 OR4C11Q6IEV9 310 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TUBA3EQ6PEY2 450 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 RPS19BP1Q86WX3 136 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 OR4N5Q8IXE1 308 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 LAS2Q8IYD9 372 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 SLC5A8Q8N695 610 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 ACOT4Q8N9L9 421 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 SRFBP1Q8NEF9 429 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 OR52B6Q8NGF0 335 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 RGMAQ96B86 450 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 NSUN5Q96P11 429 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 SIGLEC12Q96PQ1 595 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 NPAS2Q99743 824 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 UTP23Q9BRU9 249 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 CENPKQ9BS16 269 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 TBCDQ9BTW9 1192 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 HES7Q9BYE0 225 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 DEFB126Q9BYW3 111 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 ROGDIQ9GZN7 287 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 LIN28AQ9H9Z2 209 aaKnown RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 SEMA4BQ9NPR2 832 aaPredicted RBP8.28□□□□□ -1.08
SDF2-207ENST00000588472 DMRT3Q9NQL9 472 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 OSGIN2Q9Y236 505 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 MMACHCQ9Y4U1 282 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 PCDHGA11Q9Y5H2 935 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 SPACA6W5XKT8 324 aa8.28□□□□□ -1.08
SDF2-207ENST00000588472 IGKV3D-11A0A0A0MRZ8 115 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 IQANK1A0A1B0GTG1 560 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 ARHGAP10A1A4S6 786 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 CCDC189A1A4V9 331 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 GABRR3A8MPY1 467 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 KLK8O60259 260 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 CTNSO60931 367 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 PRKRAO75569 313 aaKnown RBP8.27□□□□□ -1.09
SDF2-207ENST00000588472 RASAL1O95294 804 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 ABHD2P08910 425 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 PYGBP11216 843 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 COL6A2P12110 1019 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 CD46P15529 392 aa8.27□□□□□ -1.09
SDF2-207ENST00000588472 PTX3P26022 381 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms