RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 OR5M3Q8NGP4 307 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 SLCO2A1Q92959 643 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 RHBDF1Q96CC6 855 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 LRRC39Q96DD0 335 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 TMEM79Q9BSE2 394 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 NPLQ9BXD5 320 aaPredicted RBP12.75□□□□□ -0.37
HDAC5-208ENST00000588419 UCK2Q9BZX2 261 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 OR8D2Q9GZM6 311 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
HDAC5-208ENST00000588419 DEPPQ9NTK1 212 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 DNAJC11Q9NVH1 559 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 RNF6Q9Y252 685 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 YARS2Q9Y2Z4 477 aaKnown RBP12.75□□□□□ -0.37
HDAC5-208ENST00000588419 CLCA3PQ9Y6N3 262 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 LRIT2A6NDA9 550 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 FANCGO15287 622 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 PHGDHO43175 533 aaKnown RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 CCNT2O60583 730 aaKnown RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 LDB3O75112 727 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 S100BP04271 92 aaPredicted RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 TCP1P17987 556 aaKnown RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 SLC6A12P48065 614 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 MTTPP55157 894 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 LIM2P55344 173 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 PPIAP62937 165 aaKnown RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 ID2Q02363 134 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 TERF2Q15554 542 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 TGFBIQ15582 683 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 ZNF750Q32MQ0 723 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 TMEM211Q6ICI0 200 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 ARHGAP11AQ6P4F7 1023 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 SYDE1Q6ZW31 735 aaPredicted RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 TMEM200AQ86VY9 491 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 CCDC71Q8IV32 467 aaPredicted RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 ZNF595Q8IYB9 648 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 ZBED8Q8IZ13 594 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 TMEM132CQ8N3T6 1108 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 ZNF321PQ8N8H1 164 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 ZFP62Q8NB50 900 aaPredicted RBP12.74□□□□□ -0.37
HDAC5-208ENST00000588419 OR2L5Q8NG80 312 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 OR5M9Q8NGP3 310 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 C16orf52Q8NHV5 167 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 RND1Q92730 232 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 C14orf79Q96F83 325 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 SERINC2Q96SA4 455 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 SPOCK3Q9BQ16 436 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 RHOJQ9H4E5 214 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 CD274Q9NZQ7 290 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 TXNDC16Q9P2K2 825 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 HRH3Q9Y5N1 445 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 LIPGQ9Y5X9 500 aa12.74□□□□□ -0.37
HDAC5-208ENST00000588419 NINQ8N4C6 2090 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 EFCAB8A8MWE9 144 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 CLEC3AO75596 197 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 SEC31AO94979 1220 aaKnown RBP12.73□□□□□ -0.37
HDAC5-208ENST00000588419 PCNAP12004 261 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 CHRNB4P30926 498 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 HPDP32754 393 aaPredicted RBP12.73□□□□□ -0.37
HDAC5-208ENST00000588419 RIPPLY3P57055 190 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 NUP107P57740 925 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 MRPS25P82663 173 aaKnown RBP12.73□□□□□ -0.37
HDAC5-208ENST00000588419 TGM3Q08188 693 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 PMPCAQ10713 525 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 ELAVL1Q15717 326 aaKnown RBP12.73□□□□□ -0.37
HDAC5-208ENST00000588419 ZNF585AQ6P3V2 769 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 PAOXQ6QHF9 649 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 HSDL2Q6YN16 418 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 VN1R5Q7Z5H4 357 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 GPSM1Q86YR5 675 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 TCAIMQ8N3R3 496 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 OR2M7Q8NG81 312 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 OR10Q1Q8NGQ4 319 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 ASB5Q8WWX0 329 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 DAZLQ92904 295 aaKnown RBP12.73□□□□□ -0.37
HDAC5-208ENST00000588419 QRFPRQ96P65 431 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 F2RL3Q96RI0 385 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 RASL10BQ96S79 203 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 ALOXE3Q9BYJ1 711 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 TTTY12Q9BZ98 90 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 ENKD1Q9H0I2 346 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 EXO5Q9H790 373 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
HDAC5-208ENST00000588419 MCCC2Q9HCC0 563 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 PNPLA3Q9NST1 481 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 NSMCE4AQ9NXX6 385 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 TNFRSF10DQ9UBN6 386 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 DAPP1Q9UN19 280 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 MTO1Q9Y2Z2 717 aaKnown RBP12.73□□□□□ -0.37
HDAC5-208ENST00000588419 SNX24Q9Y343 169 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 DCHS2Q6V1P9 2916 aa12.73□□□□□ -0.37
HDAC5-208ENST00000588419 POLQO75417 2590 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 C17orf105B2RV13 164 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 RTCAO00442 366 aaKnown RBP12.72□□□□□ -0.37
HDAC5-208ENST00000588419 TAPBPO15533 448 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 CCDC166P0CW27 439 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 GSTM2P28161 218 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 MSH2P43246 934 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms