RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 A0A1W2PRB8 838 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 TRBC2A0A5B9 178 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 H3BM21 787 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 NPC1O15118 1278 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 MTX2O75431 263 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 XPAP23025 273 aaPredicted RBP17.77■□□□□ 0.43
DDX39A-206ENST00000587730 GRK5P34947 590 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 DSTNP60981 165 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 CYP4F8P98187 520 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 C2orf80Q0P641 193 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 NCF4Q15080 339 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 Q6ZVL8 140 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 GAREM2Q75VX8 874 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 ATCAYQ86WG3 371 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 OR2A12Q8NGT7 310 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 WDR36Q8NI36 951 aaKnown RBP17.77■□□□□ 0.43
DDX39A-206ENST00000587730 KLHL6Q8WZ60 621 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 SCAMP4Q969E2 229 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 DNAH12Q6ZR08 3092 aa17.77■□□□□ 0.43
DDX39A-206ENST00000587730 PSMD11O00231 422 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 RGS13O14921 159 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 UGT2B17O75795 530 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 OSMP13725 252 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 LAG3P18627 525 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 FUT4P22083 530 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 BDKRB1P46663 353 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 OR1E2P47887 323 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 FPGSQ05932 587 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 SLBPQ14493 270 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX39A-206ENST00000587730 TSTQ16762 297 aaKnown RBP17.76■□□□□ 0.43
DDX39A-206ENST00000587730 Q6ZVU0 165 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 CYP4Z2PQ8N1L4 340 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 RASGEF1AQ8N9B8 481 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 FAM83FQ8NEG4 500 aaPredicted RBP17.76■□□□□ 0.43
DDX39A-206ENST00000587730 OR4K1Q8NGD4 311 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 OR9Q2Q8NGE9 314 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 WRAP53Q9BUR4 548 aaKnown RBP17.76■□□□□ 0.43
DDX39A-206ENST00000587730 MND1Q9BWT6 205 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 UCK2Q9BZX2 261 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 A4GALTQ9NPC4 353 aa17.76■□□□□ 0.43
DDX39A-206ENST00000587730 RPL36Q9Y3U8 105 aaKnown RBP17.76■□□□□ 0.43
DDX39A-206ENST00000587730 PIPSLA2A3N6 862 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 C5orf58C9J3I9 102 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 FAAHO00519 579 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 KMOO15229 486 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TBX19O60806 448 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 C1orf105O95561 183 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 LRG1P02750 347 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 CTSAP10619 480 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 NNMTP40261 264 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TBPL1P62380 186 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 RUNX1T1Q06455 604 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 ILKQ13418 452 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 C1DQ13901 141 aaKnown RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 STARD3Q14849 445 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 SF1Q15637 639 aaKnown RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 SLC5A12Q1EHB4 618 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 BCL7AQ4VC05 210 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF770Q6IQ21 691 aaPredicted RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 KLHL17Q6TDP4 642 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 CCDC149Q6ZUS6 474 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 GDPD3Q7L5L3 318 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 LINC00471Q8N535 108 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 CHST14Q8NCH0 376 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 SETD7Q8WTS6 366 aaKnown RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 PDXPQ96GD0 296 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 WDFY2Q96P53 400 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 OR2B2Q9GZK3 357 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 SLC25A19Q9HC21 320 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 PCDHGB2Q9Y5G2 931 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 ARHGAP33O14559 1287 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 PCDH17O14917 1159 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TRAPPC2P0DI81 140 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TRAPPC2BP0DI82 140 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 PSMA1P25786 263 aaKnown RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 GTF2E2P29084 291 aaKnown RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 ETV3P41162 512 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 GSTM5P46439 218 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 RGS19P49795 217 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 RORCP51449 518 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 PRMT2P55345 433 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TMEM115Q12893 351 aaPredicted RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF852Q6ZMS4 543 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 ARMCX6Q7L4S7 300 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TECPR1Q7Z6L1 1165 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TMC8Q8IU68 726 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF480Q8WV37 535 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 GTPBP3Q969Y2 492 aaKnown RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 TMEM80Q96HE8 168 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 NMNAT1Q9HAN9 279 aaPredicted RBP17.75■□□□□ 0.43
DDX39A-206ENST00000587730 SMURF1Q9HCE7 757 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 MIEF1Q9NQG6 463 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 RAB23Q9ULC3 237 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 MAP4K5Q9Y4K4 846 aa17.75■□□□□ 0.43
DDX39A-206ENST00000587730 PRAMEF33A0A0G2JMD5 474 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 SLC35F4A4IF30 521 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 KRT87PA6NCN2 255 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 TLR4O00206 839 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 PRAMEF10O60809 474 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 NPPBP16860 134 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms