RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 VN1R5Q7Z5H4 357 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 LIX1LQ8IVB5 337 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 DMRTC2Q8IXT2 367 aaPredicted RBP10.8□□□□□ -0.68
LIG3-207ENST00000586119 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.8□□□□□ -0.68
LIG3-207ENST00000586119 TBC1D19Q8N5T2 526 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 TRPV3Q8NET8 790 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 CCT6BQ92526 530 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 RND1Q92730 232 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 ESAMQ96AP7 390 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 MS4A6EQ96DS6 147 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 VMP1Q96GC9 406 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 SEC16BQ96JE7 1060 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 QRFPRQ96P65 431 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 ERP44Q9BS26 406 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 ERVK-11Q9UQG0 969 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 CHMP2BQ9UQN3 213 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 UTP11Q9Y3A2 253 aaKnown RBP10.8□□□□□ -0.68
LIG3-207ENST00000586119 LRIT2A6NDA9 550 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 EFCAB8A8MWE9 144 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 CDK2AP1O14519 115 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 ERI3O43414 337 aaKnown RBP10.79□□□□□ -0.68
LIG3-207ENST00000586119 ZFAND5O76080 213 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 CELA3AP09093 270 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 C1GALT1C1LP0DN25 315 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 IVDP26440 423 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 MSX1P28360 303 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 CHRNB4P30926 498 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 SOX3P41225 446 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 SSR4P51571 173 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 PLA2G16P53816 162 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 DLX5P56178 289 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 PLGLB1Q02325 96 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 SLC13A2Q13183 592 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 MORF4L2Q15014 288 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 RTL6Q6ICC9 239 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 TMEM211Q6ICI0 200 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 ZNF585AQ6P3V2 769 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 SLCO4C1Q6ZQN7 724 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 KLHDC8AQ8IYD2 350 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 SPATA6LQ8N4H0 392 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 PSD4Q8NDX1 1056 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 ARMC2Q8NEN0 867 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 OR2M7Q8NG81 312 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 DOK4Q8TEW6 326 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 ATL1Q8WXF7 558 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 PDLIM5Q96HC4 596 aaKnown RBP10.79□□□□□ -0.68
LIG3-207ENST00000586119 TP63Q9H3D4 680 aaPredicted RBP10.79□□□□□ -0.68
LIG3-207ENST00000586119 LIME1Q9H400 295 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 KCNJ16Q9NPI9 418 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 SEMA4BQ9NPR2 832 aaPredicted RBP10.79□□□□□ -0.68
LIG3-207ENST00000586119 WHRNQ9P202 907 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 ZNF490Q9ULM2 529 aaPredicted RBP10.79□□□□□ -0.68
LIG3-207ENST00000586119 PPIEQ9UNP9 301 aaKnown RBP10.79□□□□□ -0.68
LIG3-207ENST00000586119 YARS2Q9Y2Z4 477 aaKnown RBP10.79□□□□□ -0.68
LIG3-207ENST00000586119 MMACHCQ9Y4U1 282 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 KCNE2Q9Y6J6 123 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 ARHGAP21Q5T5U3 1957 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 NAV3Q8IVL0 2385 aa10.79□□□□□ -0.68
LIG3-207ENST00000586119 ITPR3Q14573 2671 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 PABPN1LA6NDY0 278 aaKnown RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 URADA6NGE7 173 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 NCF1BA6NI72 391 aaPredicted RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 A8MVJ9 347 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 NCF1CA8MVU1 366 aaPredicted RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 CYR61O00622 381 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 TAPBPO15533 448 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 WDR47O94967 919 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 TTC4O95801 387 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 HOXD4P09016 255 aaPredicted RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 ENO2P09104 434 aaPredicted RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 NCF1P14598 390 aaPredicted RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 ZNF37AP17032 561 aaPredicted RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 CERS1P27544 350 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 DNAJA1P31689 397 aaKnown RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 GMPRP36959 345 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 DNASE1L1P49184 302 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 HK2P52789 917 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 ART1P52961 327 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 RAB38P57729 211 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 TAS2R39P59534 338 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 SKP1P63208 163 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 ID2Q02363 134 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 CAV1Q03135 178 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 CALCOCO2Q13137 446 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 BMPR2Q13873 1038 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 SLBPQ14493 270 aaKnown RBP eCLIP10.78□□□□□ -0.68
LIG3-207ENST00000586119 TSNQ15631 228 aaKnown RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 FAM45BPQ6NSW5 357 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 NIPAL1Q6NVV3 410 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 ARHGAP11AQ6P4F7 1023 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 TMEM251Q8N6I4 163 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 OR5M3Q8NGP4 307 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 OR10Q1Q8NGQ4 319 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 FAM45AQ8TCE6 357 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 PTPMT1Q8WUK0 201 aaPredicted RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 ASB5Q8WWX0 329 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 ASB15Q8WXK1 588 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 RHBDF1Q96CC6 855 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 FAR2Q96K12 515 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms