RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ANXA4P09525 319 aaPredicted RBP12□□□□□ -0.49
VMP1-202ENST00000585847 HOXB6P17509 224 aaKnown RBP12□□□□□ -0.49
VMP1-202ENST00000585847 CSTF2P33240 577 aaKnown RBP eCLIP12□□□□□ -0.49
VMP1-202ENST00000585847 CPOXP36551 454 aa12□□□□□ -0.49
VMP1-202ENST00000585847 TSPAN7P41732 249 aa12□□□□□ -0.49
VMP1-202ENST00000585847 KIR3DL1P43629 444 aa12□□□□□ -0.49
VMP1-202ENST00000585847 GCGRP47871 477 aa12□□□□□ -0.49
VMP1-202ENST00000585847 EMP3P54852 163 aa12□□□□□ -0.49
VMP1-202ENST00000585847 C3orf38Q5JPI3 329 aa12□□□□□ -0.49
VMP1-202ENST00000585847 SAMD4BQ5PRF9 694 aaKnown RBP12□□□□□ -0.49
VMP1-202ENST00000585847 REP15Q6BDI9 236 aa12□□□□□ -0.49
VMP1-202ENST00000585847 FRMPD2BQ6IN97 320 aa12□□□□□ -0.49
VMP1-202ENST00000585847 CYB5D1Q6P9G0 228 aa12□□□□□ -0.49
VMP1-202ENST00000585847 PAOXQ6QHF9 649 aa12□□□□□ -0.49
VMP1-202ENST00000585847 SCIMPQ6UWF3 145 aa12□□□□□ -0.49
VMP1-202ENST00000585847 BNC2Q6ZN30 1099 aaPredicted RBP12□□□□□ -0.49
VMP1-202ENST00000585847 VN1R4Q7Z5H5 301 aa12□□□□□ -0.49
VMP1-202ENST00000585847 ASPGQ86U10 573 aa12□□□□□ -0.49
VMP1-202ENST00000585847 FUNDC1Q8IVP5 155 aa12□□□□□ -0.49
VMP1-202ENST00000585847 SAMD14Q8IZD0 417 aaPredicted RBP12□□□□□ -0.49
VMP1-202ENST00000585847 OR4N4Q8N0Y3 316 aa12□□□□□ -0.49
VMP1-202ENST00000585847 ARHGEF39Q8N4T4 335 aa12□□□□□ -0.49
VMP1-202ENST00000585847 C1orf52Q8N6N3 182 aaKnown RBP12□□□□□ -0.49
VMP1-202ENST00000585847 OR2L5Q8NG80 312 aa12□□□□□ -0.49
VMP1-202ENST00000585847 OR1L3Q8NH93 324 aa12□□□□□ -0.49
VMP1-202ENST00000585847 WDR36Q8NI36 951 aaKnown RBP12□□□□□ -0.49
VMP1-202ENST00000585847 ADAMTS18Q8TE60 1221 aa12□□□□□ -0.49
VMP1-202ENST00000585847 OR2A5Q96R48 311 aa12□□□□□ -0.49
VMP1-202ENST00000585847 HBEGFQ99075 208 aa12□□□□□ -0.49
VMP1-202ENST00000585847 CMKLR1Q99788 373 aa12□□□□□ -0.49
VMP1-202ENST00000585847 FAIM2Q9BWQ8 316 aa12□□□□□ -0.49
VMP1-202ENST00000585847 BHLHE41Q9C0J9 482 aaPredicted RBP12□□□□□ -0.49
VMP1-202ENST00000585847 STRADBQ9C0K7 418 aa12□□□□□ -0.49
VMP1-202ENST00000585847 REXO4Q9GZR2 422 aaKnown RBP12□□□□□ -0.49
VMP1-202ENST00000585847 DDX31Q9H8H2 851 aaKnown RBP12□□□□□ -0.49
VMP1-202ENST00000585847 PDE7BQ9NP56 450 aa12□□□□□ -0.49
VMP1-202ENST00000585847 SOHLH2Q9NX45 425 aa12□□□□□ -0.49
VMP1-202ENST00000585847 LYARQ9NX58 379 aaKnown RBP12□□□□□ -0.49
VMP1-202ENST00000585847 PCDHGA8Q9Y5G5 932 aa12□□□□□ -0.49
VMP1-202ENST00000585847 SDK2Q58EX2 2172 aa12□□□□□ -0.49
VMP1-202ENST00000585847 A0A0J9YVX5 310 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 BLACEA4D250 179 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 LRIT2A6NDA9 550 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 C9orf172C9J069 976 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 PLD2O14939 933 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 P2RX6O15547 441 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 MED26O95402 600 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 TBX6O95947 436 aaPredicted RBP11.99□□□□□ -0.49
VMP1-202ENST00000585847 PGRP06401 933 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 FGF5P12034 268 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 DRD2P14416 443 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 PPIBP23284 216 aaKnown RBP11.99□□□□□ -0.49
VMP1-202ENST00000585847 PGM1P36871 562 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 BCL6P41182 706 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
VMP1-202ENST00000585847 MAGEA8P43361 318 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 TRPC1P48995 793 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 EIF3IQ13347 325 aaKnown RBP11.99□□□□□ -0.49
VMP1-202ENST00000585847 PDE7AQ13946 482 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 MAP7Q14244 749 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 RTP5Q14D33 572 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 WASHC2DQ5SRD0 308 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 PRAMEF17Q5VTA0 474 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 ADNP2Q6IQ32 1131 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 ABHD13Q7L211 337 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 VN1R5Q7Z5H4 357 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 GPR180Q86V85 440 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 MCATQ8IVS2 390 aaKnown RBP11.99□□□□□ -0.49
VMP1-202ENST00000585847 RIMKLAQ8IXN7 391 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 DSELQ8IZU8 1212 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 TMEM132CQ8N3T6 1108 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 ANKRD53Q8N9V6 530 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 OR8J3Q8NGG0 315 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 CREB3L4Q8TEY5 395 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 JADE3Q92613 823 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 RCN3Q96D15 328 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 APIPQ96GX9 242 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 ITCHQ96J02 903 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 MARK4Q96L34 752 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 OR6C1Q96RD1 312 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 SLC6A16Q9GZN6 736 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 AICDAQ9GZX7 198 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 SPRTNQ9H040 489 aaPredicted RBP11.99□□□□□ -0.49
VMP1-202ENST00000585847 ACTL8Q9H568 366 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 WDR41Q9HAD4 459 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 FBXO8Q9NRD0 319 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 FGF21Q9NSA1 209 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 MS4A12Q9NXJ0 267 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 PISDQ9UG56 409 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 ATP6V1HQ9UI12 483 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 CROTQ9UKG9 612 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 G3BP2Q9UN86 482 aaKnown RBP11.99□□□□□ -0.49
VMP1-202ENST00000585847 CORO2BQ9UQ03 480 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 MAN2B2Q9Y2E5 1009 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 GMEB1Q9Y692 573 aa11.99□□□□□ -0.49
VMP1-202ENST00000585847 SEC16AO15027 2179 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SYNDIG1LA6NDD5 238 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 TRABD2BA6NFA1 517 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 H0YGG7 62 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 AIM2O14862 343 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms