RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 CPN2P22792 545 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 ATP5A1P25705 553 aaKnown RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 SERPINB3P29508 390 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 BUD31P41223 144 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 RPL14P50914 215 aaKnown RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 MAPK12P53778 367 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 EMP2P54851 167 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 WDR4P57081 412 aaKnown RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 RPS18P62269 152 aaKnown RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 BTKQ06187 659 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 BST1Q10588 318 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 SLAMF1Q13291 335 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 NR6A1Q15406 480 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 NKG7Q16617 165 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 VWA2Q5GFL6 755 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 AMER3Q8N944 861 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 OR5T3Q8NGG3 340 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 IP6K3Q96PC2 410 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 CCT7Q99832 543 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 SLC26A1Q9H2B4 701 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 SEMA3GQ9NS98 782 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 ZNF225Q9UK10 706 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 FBXW2Q9UKT8 454 aa13.1□□□□□ -0.31
TRAF4-215ENST00000584944 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 MRPS18BQ9Y676 258 aaKnown RBP13.1□□□□□ -0.31
TRAF4-215ENST00000584944 MDC1Q14676 2089 aaKnown RBP13.09□□□□□ -0.31
TRAF4-215ENST00000584944 PLPP1O14494 284 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 PRMT3O60678 531 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 SEC22BO75396 215 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 SKAP2O75563 359 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-215ENST00000584944 LYPLA1O75608 230 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-215ENST00000584944 KLK1P06870 262 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 FGF4P08620 206 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 LINC00032P0C843 101 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 FOXA1P55317 472 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 KLC1Q07866 573 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 SLC13A2Q13183 592 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 SSPNQ14714 243 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 KANK2Q63ZY3 851 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 MRPL14Q6P1L8 145 aaKnown RBP13.09□□□□□ -0.31
TRAF4-215ENST00000584944 COMMD6Q7Z4G1 85 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 CRLF3Q8IUI8 442 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 ARHGEF39Q8N4T4 335 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 C1orf52Q8N6N3 182 aaKnown RBP13.09□□□□□ -0.31
TRAF4-215ENST00000584944 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 CDC26Q8NHZ8 85 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 TWIST2Q8WVJ9 160 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 ACPTQ9BZG2 426 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 TGIF2Q9GZN2 237 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 LYRM4Q9HD34 91 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 ADAM29Q9UKF5 820 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 G3BP2Q9UN86 482 aaKnown RBP13.09□□□□□ -0.31
TRAF4-215ENST00000584944 SPTBP11277 2137 aa13.09□□□□□ -0.31
TRAF4-215ENST00000584944 BSNQ9UPA5 3926 aa13.08□□□□□ -0.31
TRAF4-215ENST00000584944 MYO18BQ8IUG5 2567 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 BLACEA4D250 179 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 IDSB3KWA1 339 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 TMEM233B4DJY2 109 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 PCDH17O14917 1159 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 ITM2AO43736 263 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 BMP10O95393 424 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 ONECUT2O95948 504 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 GBAP04062 536 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 SMIM10L1P0DMW3 83 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 MAPK1P28482 360 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 HTR6P50406 440 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 RRADP55042 308 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 RAB38P57729 211 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 HMGCS1Q01581 520 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 ACTN3Q08043 901 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-215ENST00000584944 STX4Q12846 297 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 NSDHLQ15738 373 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 PDCD2Q16342 344 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-215ENST00000584944 TUBB8Q3ZCM7 444 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 GALNTL6Q49A17 601 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 ATP6AP1LQ52LC2 224 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 IRAK1BP1Q5VVH5 260 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 FAAH2Q6GMR7 532 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 COX15Q7KZN9 410 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 GPR180Q86V85 440 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 ZC3H7AQ8IWR0 971 aaKnown RBP13.08□□□□□ -0.32
TRAF4-215ENST00000584944 CA13Q8N1Q1 262 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
TRAF4-215ENST00000584944 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 THAP4Q8WY91 577 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 ZNF75CPQ92670 426 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-215ENST00000584944 SMIM10Q96HG1 83 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 PTCHD1Q96NR3 888 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 CATSPER2Q96P56 530 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 FAIM2Q9BWQ8 316 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 SORBS1Q9BX66 1292 aaKnown RBP13.08□□□□□ -0.32
TRAF4-215ENST00000584944 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 PRDM7Q9NQW5 492 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 SLC22A11Q9NSA0 550 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 POLHQ9Y253 713 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 MAN2B2Q9Y2E5 1009 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 DNAJC15Q9Y5T4 150 aa13.08□□□□□ -0.32
TRAF4-215ENST00000584944 TRPC5OSA6NMA1 111 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms