RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 XPR1Q9UBH6 696 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 A8MUI8 341 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 H0YIV9 168 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 CYR61O00622 381 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 SCELO95171 688 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 PIK3CBP42338 1070 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 TDGF1P3P51864 188 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 MTTPP55157 894 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 RAB38P57729 211 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 OR4D2P58180 307 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 EXT1Q16394 746 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 BTBD16Q32M84 506 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 TMEM35AQ53FP2 167 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 DEPDC1Q5TB30 811 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 TRIM40Q6P9F5 258 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 ZNF793Q6ZN11 406 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 SCUBE1Q8IWY4 988 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 PTGR2Q8N8N7 351 aaPredicted RBP16.71■□□□□ 0.27
ERBB2-221ENST00000584888 TMEM52Q8NDY8 209 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 NR4A3Q92570 626 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 TBCDQ9BTW9 1192 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 IPPKQ9H8X2 491 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 MMP25Q9NPA2 562 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 ADGRE2Q9UHX3 823 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 TEKT2Q9UIF3 430 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 DAPP1Q9UN19 280 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 MMACHCQ9Y4U1 282 aa16.71■□□□□ 0.27
ERBB2-221ENST00000584888 A0A088AWK7 358 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 A0A1B0GUH1 482 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 OR5H15A6NDH6 313 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 TGFBR3LH3BV60 316 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 PSMD12O00232 456 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-221ENST00000584888 OR7A17O14581 309 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 B3GALT2O43825 422 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 TGFB1P01137 390 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 MAOAP21397 527 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 ZNF10P21506 573 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-221ENST00000584888 CERS1P27544 350 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 PIK3CGP48736 1102 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 HNRNPFP52597 415 aaKnown RBP16.7■□□□□ 0.26
ERBB2-221ENST00000584888 LIM2P55344 173 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 KCNK10P57789 538 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 SLC26A5P58743 744 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 ZNF33BQ06732 778 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 ACTN3Q08043 901 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-221ENST00000584888 RNF175Q8N4F7 328 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 SRFBP1Q8NEF9 429 aaKnown RBP16.7■□□□□ 0.26
ERBB2-221ENST00000584888 NFAM1Q8NET5 270 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-221ENST00000584888 HUS1BQ8NHY5 278 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 ELP5Q8TE02 316 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 PHF21BQ96EK2 531 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 CMTM7Q96FZ5 175 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 SCYL1Q96KG9 808 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 KCNC2Q96PR1 638 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 LPAR4Q99677 370 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 NPAS2Q99743 824 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 NTMT1Q9BV86 223 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 C1QTNF3Q9BXJ4 246 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 MRPL46Q9H2W6 279 aaKnown RBP16.7■□□□□ 0.26
ERBB2-221ENST00000584888 ZBTB26Q9HCK0 441 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 PSD3Q9NYI0 1048 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 PCTPQ9UKL6 214 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 ANGPTL3Q9Y5C1 460 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 PCDHGA11Q9Y5H2 935 aa16.7■□□□□ 0.26
ERBB2-221ENST00000584888 CROCCQ5TZA2 2017 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 PRAMEF2O60811 474 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ZG16O60844 167 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 RASAL1O95294 804 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 PCNAP12004 261 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ATP5A1P25705 553 aaKnown RBP16.69■□□□□ 0.26
ERBB2-221ENST00000584888 EEF1DP29692 281 aaKnown RBP16.69■□□□□ 0.26
ERBB2-221ENST00000584888 HSD17B7P56937 341 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 TGM3Q08188 693 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ZRSR2Q15696 482 aaKnown RBP16.69■□□□□ 0.26
ERBB2-221ENST00000584888 TEX35Q5T0J7 233 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 KHDRBS2Q5VWX1 349 aaKnown RBP16.69■□□□□ 0.26
ERBB2-221ENST00000584888 CHSY3Q70JA7 882 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 LCA5Q86VQ0 697 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 FJX1Q86VR8 437 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ZNF595Q8IYB9 648 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 SUN3Q8TAQ9 357 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 WDR20Q8TBZ3 569 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ADAMTS18Q8TE60 1221 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ROGDIQ9GZN7 287 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ANKZF1Q9H8Y5 726 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 ACTR8Q9H981 624 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 LYRM4Q9HD34 91 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 DMRT3Q9NQL9 472 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 PSMC3IPQ9P2W1 217 aaPredicted RBP16.69■□□□□ 0.26
ERBB2-221ENST00000584888 RNF11Q9Y3C5 154 aa16.69■□□□□ 0.26
ERBB2-221ENST00000584888 IQANK1A0A1B0GTG1 560 aa16.68■□□□□ 0.26
ERBB2-221ENST00000584888 SMIM24O75264 130 aa16.68■□□□□ 0.26
ERBB2-221ENST00000584888 RPS17P08708 135 aaKnown RBP16.68■□□□□ 0.26
ERBB2-221ENST00000584888 MST1P26927 711 aa16.68■□□□□ 0.26
ERBB2-221ENST00000584888 ARFIP1P53367 373 aa16.68■□□□□ 0.26
ERBB2-221ENST00000584888 SRSF11Q05519 484 aaKnown RBP16.68■□□□□ 0.26
ERBB2-221ENST00000584888 TRAF3Q13114 568 aa16.68■□□□□ 0.26
ERBB2-221ENST00000584888 C1QL3Q5VWW1 255 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms