RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 CKAP2Q8WWK9 683 aa19.25■□□□□ 0.67
SRSF1-206ENST00000583741 EXT2Q93063 718 aa19.25■□□□□ 0.67
SRSF1-206ENST00000583741 ZNF354BQ96LW1 612 aa19.25■□□□□ 0.67
SRSF1-206ENST00000583741 HCN3Q9P1Z3 774 aa19.25■□□□□ 0.67
SRSF1-206ENST00000583741 MEMO1Q9Y316 297 aa19.25■□□□□ 0.67
SRSF1-206ENST00000583741 SYCE1LA8MT33 242 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 H0YIG0 161 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 ZNHIT1O43257 154 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 CLDN14O95500 239 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 ALDH3A1P30838 453 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 SSTR2P30874 369 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 HSD17B2P37059 387 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 CD96P40200 585 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 XCR1P46094 333 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 KCNC1P48547 511 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 GNGT1P63211 74 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 OR1C1Q15619 314 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 PDK4Q16654 411 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 NDUFA9Q16795 377 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 SBSNQ6UWP8 590 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 FRA10AC1Q70Z53 315 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 ANKRD37Q7Z713 158 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 C10orf107Q8IVU9 208 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 OR51Q1Q8NH59 317 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 SCMH1Q96GD3 660 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 MAGEB18Q96M61 343 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 FRMD6Q96NE9 622 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 MACROD1Q9BQ69 325 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 KCNK13Q9HB14 408 aa19.24■□□□□ 0.67
SRSF1-206ENST00000583741 ASPDHA6ND91 283 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 NPIPA5E9PKD4 350 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 H7BY64 318 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 SMIM24O75264 130 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 NSA2O95478 260 aaKnown RBP19.23■□□□□ 0.67
SRSF1-206ENST00000583741 C8GP07360 202 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 IL1RNP18510 177 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 ABATP80404 500 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 ALDH6A1Q02252 535 aaKnown RBP19.23■□□□□ 0.67
SRSF1-206ENST00000583741 SP140Q13342 867 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 TESK1Q15569 626 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 KRTCAP3Q53RY4 240 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 SPINK14Q6IE38 97 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 SREK1Q8WXA9 508 aaKnown RBP19.23■□□□□ 0.67
SRSF1-206ENST00000583741 CCDC126Q96EE4 140 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 PRAP1Q96NZ9 151 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 OXSMQ9NWU1 459 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 C19orf25Q9UFG5 118 aaPredicted RBP19.23■□□□□ 0.67
SRSF1-206ENST00000583741 ADAMTS6Q9UKP5 1117 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 NPIPA1Q9UND3 350 aa19.23■□□□□ 0.67
SRSF1-206ENST00000583741 ZNF839A8K0R7 811 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 SUPT3HB4E1H0 165 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 UBXN8O00124 270 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 DLX3O60479 287 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 SUPT3HO75486 399 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 CYC1P08574 325 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 ATP5F1P24539 256 aaPredicted RBP19.22■□□□□ 0.67
SRSF1-206ENST00000583741 EEF1DP29692 281 aaKnown RBP19.22■□□□□ 0.67
SRSF1-206ENST00000583741 PPP1R3AQ16821 1122 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 GPSM1Q86YR5 675 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 SIAH3Q8IW03 269 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 TRIM42Q8IWZ5 723 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 FBXO15Q8NCQ5 510 aaPredicted RBP19.22■□□□□ 0.67
SRSF1-206ENST00000583741 LRRC8CQ8TDW0 803 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 UTP23Q9BRU9 249 aaKnown RBP19.22■□□□□ 0.67
SRSF1-206ENST00000583741 CCDC134Q9H6E4 229 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 OARD1Q9Y530 152 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 SGK494L7N484 410 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 SLC16A5O15375 505 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 BGNP21810 368 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 CBX1P83916 185 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 HSF1Q00613 529 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 TGFBIQ15582 683 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 CHI3L2Q15782 390 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 MEP1AQ16819 746 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 THEMIS2Q5TEJ8 643 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 UBE2R2Q712K3 238 aaPredicted RBP19.22■□□□□ 0.67
SRSF1-206ENST00000583741 CHERPQ8IWX8 916 aaKnown RBP19.22■□□□□ 0.67
SRSF1-206ENST00000583741 PPP1R14CQ8TAE6 165 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 ASB11Q8WXH4 323 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 NUDT4Q9NZJ9 180 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 TMCO1Q9UM00 188 aa19.22■□□□□ 0.67
SRSF1-206ENST00000583741 SPG11Q96JI7 2443 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 GABRR3A8MPY1 467 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 A8MT66 165 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 GFYI3L273 518 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 TRIM13O60858 407 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 ENO2P09104 434 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-206ENST00000583741 MTHFD2P13995 350 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 GFAPP14136 432 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 IMPA1P29218 277 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 LSP1P33241 339 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 BCL6P41182 706 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 PRKAA2P54646 552 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 ASPHQ12797 758 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 PHKG1Q16816 387 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 LIPMQ5VYY2 423 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 TMEM214Q6NUQ4 689 aaKnown RBP19.21■□□□□ 0.67
SRSF1-206ENST00000583741 GALNTL5Q7Z4T8 443 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 PDSS2Q86YH6 399 aa19.21■□□□□ 0.67
SRSF1-206ENST00000583741 SLC22A9Q8IVM8 553 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms