RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TMEM160Q9NX00 188 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 GALPQ9UBC7 116 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 PACSIN3Q9UKS6 424 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 ZNF148Q9UQR1 794 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 LIPT1Q9Y234 373 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 DTX4Q9Y2E6 619 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 HEATR5AQ86XA9 2040 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 KCNE1BA0A087WTH5 132 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 CTAGE15A4D2H0 777 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 MROH6A6NGR9 719 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 GFYI3L273 518 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 PSMD12O00232 456 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 SSX4O60224 188 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 CEP104O60308 925 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 LMX1BO60663 402 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 TNFSF13O75888 250 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 THBDP07204 575 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 ALOX12P18054 663 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 CD79BP40259 229 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 ASPHQ12797 758 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 KCNJ11Q14654 390 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 HERC3Q15034 1050 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 TOMM20Q15388 145 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 SLC22A10Q63ZE4 541 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 VWA1Q6PCB0 445 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 AFTPHQ6ULP2 937 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 HSDL2Q6YN16 418 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 BZW1Q7L1Q6 419 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 CTAGE6Q86UF2 777 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 LRRC56Q8IYG6 542 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 PM20D2Q8IYS1 436 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 PLD6Q8N2A8 252 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 C3orf56Q8N813 242 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 ZNF611Q8N823 705 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 NEUROG1Q92886 237 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 ALKBH8Q96BT7 664 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 TRMT61AQ96FX7 289 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 SGCZQ96LD1 299 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 OR8D2Q9GZM6 311 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 CALHM2Q9HA72 323 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 ARNT2Q9HBZ2 717 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 TMEM184CQ9NVA4 438 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 PPIEQ9UNP9 301 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 ZNF281Q9Y2X9 895 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 PCDHA13Q9Y5I0 950 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 CLDN16Q9Y5I7 305 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 MAGED1Q9Y5V3 778 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 HEATR5BQ9P2D3 2071 aa12.81□□□□□ -0.36
CSNK1D-213ENST00000580446 C4orf51C9J302 202 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 F8W8V4 182 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 OVOL3O00110 214 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 KLF4O43474 513 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 NRDCO43847 1150 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 NIPSNAP2O75323 286 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 STK10O94804 968 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 SLC35G6P0C7Q6 338 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 DIO3P55073 304 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 EIF3BP55884 814 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 TFDP2Q14188 446 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 RCAN2Q14206 197 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 ETFDHQ16134 617 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 ACSBG2Q5FVE4 666 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 BICRALQ6AI39 1079 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 OPN5Q6U736 354 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 FAM13CQ8NE31 585 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 OR10G3Q8NGC4 313 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 HTRA1Q92743 480 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 QRFPRQ96P65 431 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 TNFRSF13CQ96RJ3 184 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 FERMT1Q9BQL6 677 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 HEMGNQ9BXL5 484 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 MANSC1Q9H8J5 431 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
CSNK1D-213ENST00000580446 DOCK7Q96N67 2140 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 A0A1W2PNV4 684 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 MACROD2A1Z1Q3 448 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 PRMT5O14744 637 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 TCF21O43680 179 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 AVILO75366 819 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 IFNA16P05015 189 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 CDH1P12830 882 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 RNH1P13489 461 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 CYP4B1P13584 511 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 PTNP21246 168 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 KCNJ5P48544 419 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 RNF4P78317 190 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 VLDLRP98155 873 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 FASTKD1Q53R41 847 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 CTSL3PQ5NE16 218 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 ALKBH5Q6P6C2 394 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 VSIG1Q86XK7 387 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 CA13Q8N1Q1 262 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 DEPDC4Q8N2C3 294 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 CNEP1R1Q8N9A8 125 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 MFSD9Q8NBP5 474 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms