RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 E9PLN8 166 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 FAM227AF5H4B4 570 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 MAN1A2O60476 641 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 UGDHO60701 494 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 PRAMEF4O60810 478 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 KERAO60938 352 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 ZFAND5O76080 213 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 B3GALT4O96024 378 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 SLC35E2BP0CK96 405 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 ZNF24P17028 368 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 EPORP19235 508 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 HNF4AP41235 474 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 LIM2P55344 173 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 DOC2AQ14183 400 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 OR4D1Q15615 310 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 XKR6Q5GH73 641 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 PRAMEF9Q5VWM5 478 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 RGS9BPQ6ZS82 235 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 CEP128Q6ZU80 1094 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 MRGPRGQ86SM5 289 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 RELL1Q8IUW5 271 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 KIF2BQ8N4N8 673 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 OR14A16Q8NHC5 309 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 ATOH8Q96SQ7 321 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 VKORC1Q9BQB6 163 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 CCDC77Q9BR77 488 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 MS4A12Q9NXJ0 267 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 PPT2Q9UMR5 302 aa13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 PHF3Q92576 2039 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-216ENST00000580419 OTOGQ6ZRI0 2925 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 K7EPI3 171 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 PHGDHO43175 533 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 MYO1DO94832 1006 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 S100BP04271 92 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CD22P20273 847 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 PIK3CBP42338 1070 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 MAGEA4P43358 317 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 HSPA7P48741 367 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 IGLV3-21P80748 117 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 PMP22Q01453 160 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 IRF8Q02556 426 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 SLC13A2Q13183 592 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 NAA30Q147X3 362 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 MAPKAPK3Q16644 382 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 C10orf62Q5T681 223 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 ZNF468Q5VIY5 522 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CHSY3Q70JA7 882 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 TBC1D1Q86TI0 1168 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CHERPQ8IWX8 916 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CYP4X1Q8N118 509 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 ACBD4Q8NC06 268 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 FBXO25Q8TCJ0 367 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 ZNF473Q8WTR7 871 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 SGCZQ96LD1 299 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 MS4A8Q9BY19 250 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 TSPYL1Q9H0U9 437 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 COPS7BQ9H9Q2 264 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CAB39LQ9H9S4 337 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 KLHL1Q9NR64 748 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CD274Q9NZQ7 290 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 RNF112Q9ULX5 631 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 MEMO1Q9Y316 297 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CLCA3PQ9Y6N3 262 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 SPACA6W5XKT8 324 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 FBN2P35556 2912 aa13.51□□□□□ -0.25
SMARCE1-216ENST00000580419 CCDC168Q8NDH2 2452 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 PRSS44E7EML9 344 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 KLK8O60259 260 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 ITGA10O75578 1167 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 LTA4HP09960 611 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 HIST1H1TP22492 207 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 PPP2R1BP30154 601 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 SSR4P51571 173 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 PLTPP55058 493 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 SRSF11Q05519 484 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 TBL3Q12788 808 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 CHIT1Q13231 466 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 C3AR1Q16581 482 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 C18orf21Q32NC0 220 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 MED27Q6P2C8 311 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 CNPY4Q8N129 248 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 CYP4Z2PQ8N1L4 340 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 TMEM156Q8N614 296 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 AMER2Q8N7J2 671 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 CMTM7Q96FZ5 175 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 FUT8Q9BYC5 575 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 HES7Q9BYE0 225 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 DPH5Q9H2P9 285 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 TIMMDC1Q9NPL8 285 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 ANKRD10Q9NXR5 420 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 MYOTQ9UBF9 498 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 ZNF223Q9UK11 482 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 ACOT9Q9Y305 439 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 ASB1Q9Y576 335 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 PDZD2O15018 2839 aa13.5□□□□□ -0.25
SMARCE1-216ENST00000580419 A0A087X1B8 175 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms