RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KCNA7Q96RP8 456 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF382Q96SR6 550 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SORT1Q99523 831 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CMKLR1Q99788 373 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 HIST1H2AJQ99878 128 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 EGFL8Q99944 293 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 MACROD1Q9BQ69 325 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 MESP1Q9BRJ9 268 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 H2AFJQ9BTM1 129 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 EFCAB11Q9BUY7 163 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TRIM54Q9BYV2 358 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 STRADBQ9C0K7 418 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 PITHD1Q9GZP4 211 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC26A1Q9H2B4 701 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TUBB1Q9H4B7 451 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL31Q9H511 634 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 NOL11Q9H8H0 719 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 IPPKQ9H8X2 491 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CNOT10Q9H9A5 744 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 PDE7BQ9NP56 450 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 DMRT3Q9NQL9 472 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 FARSBQ9NSD9 589 aaKnown RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 STARD5Q9NSY2 213 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC39A1Q9NY26 324 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 OPTCQ9UBM4 332 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TRPS1Q9UHF7 1281 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 GPN3Q9UHW5 284 aaPredicted RBP3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZFP69BQ9UJL9 534 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ANGPTL2Q9UKU9 493 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 ZMIZ1Q9ULJ6 1067 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 SNX7Q9UNH6 387 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 TNFRSF18Q9Y5U5 241 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 KCNE2Q9Y6J6 123 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CFAP46Q8IYW2 2715 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 CHD6Q8TD26 2715 aa3.59□□□□□ -1.83
SMARCE1-215ENST00000578995 BOD1L1Q8NFC6 3051 aa3.59□□□□□ -1.84
SMARCE1-215ENST00000578995 COL6A6A6NMZ7 2263 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CACNA1BQ00975 2339 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 A0A087WV48 116 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 LOC101059948A0A1B0GTJ6 334 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 A0A1B0GX78 115 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 HYKKA2RU49 373 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 LRIT2A6NDA9 550 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 VSTM2BA6NLU5 285 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MAGEB17A8MXT2 336 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM233B4DJY2 109 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 FOXE1O00358 373 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PLPP1O14494 284 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF195O14628 629 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 POLR1CO15160 346 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TM9SF1O15321 606 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 BIRC5O15392 142 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZSCAN9O15535 394 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 NPHS1O60500 1241 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 RAD1O60671 282 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 GALR3O60755 368 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CPNE3O75131 537 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SMIM24O75264 130 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CLEC3AO75596 197 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 LYPLA1O75608 230 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SCRG1O75711 98 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 OR2B3O76000 313 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 KIAA0754O94854 1291 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZWINTO95229 277 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 NSA2O95478 260 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ESRRBO95718 433 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 RECKO95980 971 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 NTRK1P04629 796 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 UMODP07911 640 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SERPINA6P08185 405 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 FGF4P08620 206 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 JMJD7P0C870 316 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MYZAPP0CAP1 466 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PRR35P0CG20 571 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MYL2P10916 166 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 LIPCP11150 499 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 GFAPP14136 432 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PRPH2P23942 346 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CD82P27701 267 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 GSTM2P28161 218 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 BSGP35613 385 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 HNF4AP41235 474 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CCT5P48643 541 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PIK3CGP48736 1102 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 HNRNPFP52597 415 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MAPK10P53779 464 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 NAGLUP54802 743 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 VSX2P58304 361 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 RAE1P78406 368 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 OCRLQ01968 901 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TBL3Q12788 808 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 LCP2Q13094 533 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 BIRC2Q13490 618 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PWP1Q13610 501 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM53BQ14153 422 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 RCN2Q14257 317 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 NAA25Q14CX7 972 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 KIAA0040Q15053 153 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZRSR2Q15696 482 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SYT16Q17RD7 645 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms