RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ADA2Q9NZK5 511 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 VPS29Q9UBQ0 182 aa9.69□□□□□ -0.86
SS18-210ENST00000578700 RUVBL1Q9Y265 456 aaKnown RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 PCYT1BQ9Y5K3 369 aaPredicted RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 CFAP20Q9Y6A4 193 aaKnown RBP9.69□□□□□ -0.86
SS18-210ENST00000578700 SHANK1Q9Y566 2161 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 C15orf38-AP3S2A0A0A6YYH1 394 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 A6NCN8 305 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 NPIPB8E9PQR5 432 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 FOXE1O00358 373 aaPredicted RBP9.68□□□□□ -0.86
SS18-210ENST00000578700 CREG1O75629 220 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 IL6P05231 212 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 ERGP11308 486 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 G6PDP11413 515 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 JAK1P23458 1154 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 HRH2P25021 359 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 SHMT2P34897 504 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 GRK3P35626 688 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 PSME3P61289 254 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 UFM1P61960 85 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 ABATP80404 500 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 ACSM2AQ08AH3 577 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 CHAF1BQ13112 559 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 NFYCQ13952 458 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 RCAN2Q14206 197 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 MAP7Q14244 749 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 RPE65Q16518 533 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 SPATS1Q496A3 300 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 VPS26BQ4G0F5 336 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 NADK2Q4G0N4 442 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 RFTN2Q52LD8 501 aaPredicted RBP9.68□□□□□ -0.86
SS18-210ENST00000578700 SPIN4Q56A73 249 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 ACSM2BQ68CK6 577 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 SUSD1Q6UWL2 747 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 ABRAXAS1Q6UWZ7 409 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 WASH2PQ6VEQ5 465 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 ARPINQ7Z6K5 226 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 LIX1Q8N485 282 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 OR7G3Q8NG95 312 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 OR9I1Q8NGQ6 314 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 OR2L8Q8NGY9 312 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 PRR7Q8TB68 274 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 JADE3Q92613 823 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 SLC22A18Q96BI1 424 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 IL17FQ96PD4 163 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 OR4K3Q96R72 315 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 CDRT15Q96T59 188 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 MTERF1Q99551 399 aaKnown RBP9.68□□□□□ -0.86
SS18-210ENST00000578700 CENPKQ9BS16 269 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 WASH6PQ9NQA3 447 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 AHSPQ9NZD4 102 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 LUZP4Q9P127 313 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 CPNE7Q9UBL6 633 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 TAC3Q9UHF0 121 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 KCND3Q9UK17 655 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 PRDM4Q9UKN5 801 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 PADI1Q9ULC6 663 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 PLAGL1Q9UM63 463 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 L3MBTL1Q9Y468 752 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 CCL27Q9Y4X3 112 aa9.68□□□□□ -0.86
SS18-210ENST00000578700 TNRC6AQ8NDV7 1962 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 A0A088AWK7 358 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 ANKDD1BA6NHY2 528 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 OR5K4A6NMS3 321 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 EEDO75530 441 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 CDH1P12830 882 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 ME2P23368 584 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 PTX3P26022 381 aaPredicted RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 VARSP26640 1264 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 CMPK1P30085 196 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 PIK3CBP42338 1070 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 ASMTP46597 345 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 EPHA4P54764 986 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 MTTPP55157 894 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 MRPL49Q13405 166 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 DNASE1L3Q13609 305 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 E2F2Q14209 437 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 RBBP5Q15291 538 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 DPY19L1Q2PZI1 675 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 SAMD4BQ5PRF9 694 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 CATSPEREQ5SY80 951 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 DUS1LQ6P1R4 473 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 TMIGD1Q6UXZ0 262 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 ADCK2Q7Z695 626 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 FUNDC1Q8IVP5 155 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 LAS2Q8IYD9 372 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 LRRC56Q8IYG6 542 aaPredicted RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 OR52E1Q8NGJ3 308 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 DNAJB8Q8NHS0 232 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 HMGCLL1Q8TB92 370 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 WDR20Q8TBZ3 569 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 PROKR1Q8TCW9 393 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 ZFPM2Q8WW38 1151 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 LCN9Q8WX39 176 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 PRPF18Q99633 342 aaKnown RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 ACAT2Q9BWD1 397 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 DENND2DQ9H6A0 471 aaPredicted RBP9.67□□□□□ -0.86
SS18-210ENST00000578700 KIR3DX1Q9H7L2 352 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 DCLRE1BQ9H816 532 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms