RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 NHSL2Q5HYW2 709 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 OR2T5Q6IEZ7 315 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 NIPAL1Q6NVV3 410 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ABHD17CQ6PCB6 329 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 FIGLAQ6QHK4 219 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ENPP6Q6UWR7 440 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 CCDC80Q76M96 950 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ABHD13Q7L211 337 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 PIWIL3Q7Z3Z3 882 aaKnown RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 PARGQ86W56 976 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ADGRF3Q8IZF5 1079 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 OR2T29Q8NH02 315 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 TMBIM1Q969X1 311 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 MS4A6EQ96DS6 147 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 NEURL3Q96EH8 262 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ZNF607Q96SK3 696 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 IER2Q9BTL4 223 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 DOHHQ9BU89 302 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ADI1Q9BV57 179 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 SPATA5L1Q9BVQ7 753 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 CAAP1Q9H8G2 361 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 TRIM45Q9H8W5 580 aaPredicted RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 C3orf14Q9HBI5 128 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 SLC6A20Q9NP91 592 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 LTB4R2Q9NPC1 389 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ACTR10Q9NZ32 417 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 USE1Q9NZ43 259 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 TAAR2Q9P1P5 351 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ZNF624Q9P2J8 865 aaPredicted RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 CPNE7Q9UBL6 633 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 KLF15Q9UIH9 416 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 CA14Q9ULX7 337 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 EXO1Q9UQ84 846 aaKnown RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ZNF780BQ9Y6R6 833 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 GSAPA4D1B5 854 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 C7orf72A4D263 438 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 A6NCN8 305 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 OR6C74A6NCV1 312 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 FAM170BA6NMN3 283 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 H0Y8X5 98 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 EI24O14681 340 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 ACOX3O15254 700 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 BMP10O95393 424 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 THRBP10828 461 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 CSNK2A2P19784 350 aaPredicted RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 MYF6P23409 242 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 ATP5A1P25705 553 aaKnown RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 PPP2R1BP30154 601 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 DNAJA1P31689 397 aaKnown RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 FRKP42685 505 aaPredicted RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 MAGEA2P43356 314 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 SELENOWP63302 87 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 CDK6Q00534 326 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 TOP3AQ13472 1001 aaPredicted RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 TP53BP2Q13625 1128 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 SLC36A3Q495N2 470 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 IFI44LQ53G44 452 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.58□□□□□ -0.72
SKA2-204ENST00000578519 NDUFAF5Q5TEU4 345 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 KIAA1614Q5VZ46 1190 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 TTC33Q6PID6 262 aaPredicted RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 TMEM64Q6YI46 380 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 GPR155Q7Z3F1 870 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 CARM1Q86X55 608 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 PTOV1Q86YD1 416 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 CHERPQ8IWX8 916 aaKnown RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 NAGSQ8N159 534 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 SPEM1Q8N4L4 309 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 ACOT4Q8N9L9 421 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 SFXN5Q8TD22 340 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 CYGBQ8WWM9 190 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 RSC1A1Q92681 617 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 RMND5BQ96G75 393 aaPredicted RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 TRAPPC9Q96Q05 1148 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 C17orf62Q9BQA9 187 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 DPH2Q9BQC3 489 aaPredicted RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 RUBCNLQ9H714 662 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 REEP1Q9H902 201 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 CLK4Q9HAZ1 481 aaKnown RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 SLC35C2Q9NQQ7 365 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 C1GALT1Q9NS00 363 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 TUBA8Q9NY65 449 aaPredicted RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 CA5BQ9Y2D0 317 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 FAM32AQ9Y421 112 aaKnown RBP10.58□□□□□ -0.72
SKA2-204ENST00000578519 KLK4Q9Y5K2 254 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 SNX8Q9Y5X2 465 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 COL4A2P08572 1712 aa10.58□□□□□ -0.72
SKA2-204ENST00000578519 TRBV23OR9-2A0A075B6M9 112 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 IGHV1OR15-9A0A0B4J2B8 117 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 A0A0J9YY10 115 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 SMIM31A0A1B0GVY4 71 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 OR2A25A4D2G3 310 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 METTL12A8MUP2 240 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 PDLIM1O00151 329 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 RTCAO00442 366 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 STK25O00506 426 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms