RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 THAP11Q96EK4 314 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 NPAS2Q99743 824 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 FOXC2Q99958 501 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 ZNF559Q9BR84 538 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 KIFC1Q9BW19 673 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 TRIM45Q9H8W5 580 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 KCNJ16Q9NPI9 418 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 NINJ2Q9NZG7 142 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 PTTG2Q9NZH5 202 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 TAC3Q9UHF0 121 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 TRIM33Q9UPN9 1127 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 ZNF148Q9UQR1 794 aa10.06□□□□□ -0.8
CALCOCO2-228ENST00000576582 E7ENX8 843 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 P2RX6O15547 441 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 NME2P1O60361 137 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 NIPSNAP2O75323 286 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 FKBP6O75344 327 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 HAUS5O94927 633 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 LYNP07948 512 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 PYGBP11216 843 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 NME2P22392 152 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 NMBRP28336 390 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 CHRNB4P30926 498 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 DNAJA1P31689 397 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 RANBP1P43487 201 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 SLCO1A2P46721 670 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 NPY2RP49146 381 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 CYB561P49447 251 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 WDR4P57081 412 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 MPP1Q00013 466 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 HSF1Q00613 529 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 MEF2AQ02078 507 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 TAP2Q03519 686 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 TSTA3Q13630 321 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 MPP2Q14168 576 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 RCN1Q15293 331 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 NSDHLQ15738 373 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 ADRM1Q16186 407 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 CNPY1Q3B7I2 92 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 SFT2D3Q587I9 215 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 C6orf163Q5TEZ5 329 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 RNF220Q5VTB9 566 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 MRNIPQ6NTE8 343 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 KLC3Q6P597 504 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 DRICH1Q6PGQ1 229 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 PAPD4Q6PIY7 484 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 C3P1Q6ZMU1 363 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 NET1Q7Z628 596 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 ADCK2Q7Z695 626 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 FGD2Q7Z6J4 655 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 CLNKQ7Z7G1 428 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 PRUNE1Q86TP1 453 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 LRRC56Q8IYG6 542 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 CCDC89Q8N998 374 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 MGARPQ8TDB4 240 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 RND1Q92730 232 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 PTCD3Q96EY7 689 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 OR1F2PQ96R84 312 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 PKP4Q99569 1192 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 CXXC4Q9H2H0 198 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 CDCP1Q9H5V8 836 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 TMEM184CQ9NVA4 438 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 BFARQ9NZS9 450 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 KLHL42Q9P2K6 505 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 HAO1Q9UJM8 370 aa10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 DRG1Q9Y295 367 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 MTO1Q9Y2Z2 717 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 INTS1Q8N201 2190 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-228ENST00000576582 PRRC2AP48634 2157 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 MAGEB17A8MXT2 336 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 KLRC4-KLRK1H3BQV0 150 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 H7BY64 318 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 SMAPO00193 183 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 HAT1O14929 419 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 TM9SF1O15321 606 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 TP73O15350 636 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 MAN1A2O60476 641 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 TOXO94900 526 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 SLC16A8O95907 504 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 TPOP07202 933 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 ETS1P14921 441 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 CHRM3P20309 590 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 OGNP20774 298 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 IVDP26440 423 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 MSX1P28360 303 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 TRHRP34981 398 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 RPL22P35268 128 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 SERPINB8P50452 374 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 SESN2P58004 480 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 RPS15AP62244 130 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 CRADDP78560 199 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 CDK16Q00536 496 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 TFF3Q07654 80 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 USP10Q14694 798 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 ABRAXAS2Q15018 415 aa10.04□□□□□ -0.8
CALCOCO2-228ENST00000576582 KLHL38Q2WGJ6 581 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms