RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MXRA5Q9NR99 2828 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 SNRNP200O75643 2136 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 CD8B2A6NJW9 211 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 ERI2A8K979 691 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 RNF223E7ERA6 249 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CD3EAPO15446 510 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 PJA2O43164 708 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CTIFO43310 598 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 SPRY1O43609 319 aaPredicted RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 PRKNO60260 465 aaPredicted RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 MFAP3LO75121 409 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 IPO7O95373 1038 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 GYPCP04921 128 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 SERPIND1P05546 499 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CCL3P10147 92 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 NEFHP12036 1026 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 PAX1P15863 534 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CCND1P24385 295 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 ADRA1DP25100 572 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 GDF1P27539 372 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 IMPA1P29218 277 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CYLC1P35663 651 aaPredicted RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 TRPC1P48995 793 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 GPR143P51810 404 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 HK2P52789 917 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 ATP5J2P56134 94 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 COPS2P61201 443 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 ACVR1Q04771 509 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 DUSP8Q13202 625 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 TNK1Q13470 666 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 PWP1Q13610 501 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 BMPR2Q13873 1038 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 GBX1Q14549 363 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 RPS6KA1Q15418 735 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CLEC12BQ2HXU8 276 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 XKR6Q5GH73 641 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CTSL3PQ5NE16 218 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 SCIMPQ6UWF3 145 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 PPP1R21Q6ZMI0 780 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 PLEKHM3Q6ZWE6 761 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 BTLAQ7Z6A9 289 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 LRRC25Q8N386 305 aaPredicted RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 TMEM132CQ8N3T6 1108 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 RASGEF1CQ8N431 466 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 TC2NQ8N9U0 490 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 MFSD9Q8NBP5 474 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 SPC24Q8NBT2 197 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 OR52K1Q8NGK4 314 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 OR5L2Q8NGL0 311 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 DAZLQ92904 295 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 ITFG2Q969R8 447 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CALR3Q96L12 384 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 CCDC138Q96M89 665 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 JSRP1Q96MG2 331 aaPredicted RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 ZFP3Q96NJ6 502 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 SLC30A3Q99726 388 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 BAG1Q99933 345 aaPredicted RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 WDR83Q9BRX9 315 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 MED18Q9BUE0 208 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 RHBGQ9H310 441 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 PIGMQ9H3S5 423 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 LIN28AQ9H9Z2 209 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 ZFATQ9P243 1243 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 COPS7AQ9UBW8 275 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 LPAR3Q9UBY5 353 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 ZNF223Q9UK11 482 aaPredicted RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 CAMK2AQ9UQM7 478 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 ZNF148Q9UQR1 794 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 MRPS33Q9Y291 106 aaKnown RBP5.42□□□□□ -1.54
SMG6-219ENST00000575663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMG6-219ENST00000575663 CLCA3PQ9Y6N3 262 aa5.42□□□□□ -1.54
SMG6-219ENST00000575663 CHD3Q12873 2000 aaKnown RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 A0A087X1B8 175 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 DEFB108AA8MXU0 73 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 E7EVH7 732 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 ZBTB14O43829 449 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 AKR1B10O60218 316 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 NIPSNAP2O75323 286 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 SOX30O94993 753 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 SIX3O95343 332 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 METTL18O95568 372 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 ESR1P03372 595 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 IFNA16P05015 189 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 ZNF888P0CJ79 500 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 CDH1P12830 882 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 ENO3P13929 434 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 CRYGSP22914 178 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 GCKP35557 465 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 PIGAP37287 484 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 CETN2P41208 172 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 MC3RP41968 323 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 NR1H2P55055 460 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 HSD17B7P56937 341 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 EEF1A1P68104 462 aaKnown RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 CCZ1BP86790 482 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 CCZ1P86791 482 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 CRYZQ08257 329 aaKnown RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 SLC13A2Q13183 592 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 KCNJ11Q14654 390 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 ELAVL1Q15717 326 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms