RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ZC3H7AQ8IWR0 971 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 ENDOVQ8N8Q3 282 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 TBC1D20Q96BZ9 403 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 MIEF2Q96C03 454 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 FCRL1Q96LA6 429 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 PPP1R36Q96LQ0 422 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 GPN2Q9H9Y4 310 aaPredicted RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 MRPS33Q9Y291 106 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 LOC101059948A0A1B0GTJ6 334 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 GNG14A0A1W2PPG7 69 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 BLACEA4D250 179 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 TMEM8BA6NDV4 472 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 VSTM2BA6NLU5 285 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 SDHDO14521 159 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 TMPRSS11DO60235 418 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 GBAP04062 536 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 CAPNS1P04632 268 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 FHP07954 510 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 PRR35P0CG20 571 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 TGIF1Q15583 401 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 MED25Q71SY5 747 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 GPR180Q86V85 440 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 STT3BQ8TCJ2 826 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 PEX11GQ96HA9 241 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 MAELQ96JY0 434 aaKnown RBP16.13■□□□□ 0.17
NUP88-210ENST00000574867 MAPKAP1Q9BPZ7 522 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 FGFR1OP2Q9NVK5 253 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 KCMF1Q9P0J7 381 aa16.13■□□□□ 0.17
NUP88-210ENST00000574867 ZNF195O14628 629 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 PEX11AO75192 247 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 BMP10O95393 424 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 CYC1P08574 325 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 ZGLP1P0C6A0 271 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 BUD31P41223 144 aaPredicted RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 RAE1P78406 368 aaKnown RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 TNFRSF17Q02223 184 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 ZNF763Q0D2J5 394 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 C6orf136Q5SQH8 315 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 NOXRED1Q6NXP6 359 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 MAVSQ7Z434 540 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 PARP9Q8IXQ6 854 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 EFCAB3Q8N7B9 438 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 FNDC5Q8NAU1 212 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 SPSB2Q99619 263 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 TRIM55Q9BYV6 548 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 POLR3HQ9Y535 204 aaPredicted RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 ASB4Q9Y574 426 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 POLR3GO15318 223 aaPredicted RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 DNAJB6O75190 326 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 ANXA4P09525 319 aaPredicted RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 TROVE2P10155 538 aaKnown RBP eCLIP16.12■□□□□ 0.17
NUP88-210ENST00000574867 CPN2P22792 545 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 PTPN4P29074 926 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 GYS2P54840 703 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 HNRNPH2P55795 449 aaKnown RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 TUBB8Q3ZCM7 444 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 RFTN2Q52LD8 501 aaPredicted RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 VWA2Q5GFL6 755 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 OR2Y1Q8NGV0 311 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 STON2Q8WXE9 905 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 CHMP6Q96FZ7 201 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 ZNF317Q96PQ6 595 aaPredicted RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 AKTIPQ9H8T0 292 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 FBXW2Q9UKT8 454 aa16.12■□□□□ 0.17
NUP88-210ENST00000574867 FARSAQ9Y285 508 aaKnown RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
NUP88-210ENST00000574867 C1QTNF9BB2RNN3 333 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 CNOT3O75175 753 aaKnown RBP16.11■□□□□ 0.17
NUP88-210ENST00000574867 C1QTNF9P0C862 333 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 LBPP18428 481 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 TLX1P31314 330 aaPredicted RBP16.11■□□□□ 0.17
NUP88-210ENST00000574867 FOLR3P41439 243 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 ERVK-8P63133 956 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 VWA5B1Q5TIE3 1220 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 OGFOD2Q6N063 350 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 EPGNQ6UW88 154 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 LARP4Q71RC2 724 aaKnown RBP eCLIP16.11■□□□□ 0.17
NUP88-210ENST00000574867 ACTRT2Q8TDY3 377 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 EBPLQ9BY08 206 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 WDR41Q9HAD4 459 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 PRDM9Q9NQV7 894 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 ASIC5Q9NY37 505 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 TCFL5Q9UL49 500 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 ATG4BQ9Y4P1 393 aa16.11■□□□□ 0.17
NUP88-210ENST00000574867 CYR61O00622 381 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 RRP8O43159 456 aaKnown RBP16.1■□□□□ 0.17
NUP88-210ENST00000574867 DIAPH2O60879 1101 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 KLF7O75840 302 aaPredicted RBP16.1■□□□□ 0.17
NUP88-210ENST00000574867 NR2F6P10588 404 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 EPHA3P29320 983 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 LSP1P33241 339 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 AQP5P55064 265 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 EMX2Q04743 252 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 ACAD11Q709F0 780 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 IKBIPQ70UQ0 350 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 ZNF595Q8IYB9 648 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 FAM47BQ8NA70 645 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 CSF3RQ99062 836 aa16.1■□□□□ 0.17
NUP88-210ENST00000574867 FAIM2Q9BWQ8 316 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms