RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 C11orf65Q8NCR3 313 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 OR6C4Q8NGE1 309 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 C1GALT1C1Q96EU7 318 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ZC3HAV1LQ96H79 300 aaKnown RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 GPR137Q96N19 417 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 MAPKAP1Q9BPZ7 522 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 WACQ9BTA9 647 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 MRPL9Q9BYD2 267 aaKnown RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 SPNS1Q9H2V7 528 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ARL15Q9NXU5 204 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 PTPRDP23468 1912 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 PLXNA4Q9HCM2 1894 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 H3BUI4 141 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 MPZL2O60487 215 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 GADD45GO95257 159 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 LGI1O95970 557 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 PIPP12273 146 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 ICAM2P13598 275 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 PCGF2P35227 344 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 INPP1P49441 399 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 CRYBB1P53674 252 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 TWF1Q12792 350 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 HKDC1Q2TB90 917 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 DUSP28Q4G0W2 176 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 ZNF57Q68EA5 555 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 FAM122CQ6P4D5 195 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 ZNF852Q6ZMS4 543 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 MSANTD1Q6ZTZ1 278 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 ZBTB2Q8N680 514 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 TM9SF2Q99805 663 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 PPP1R3EQ9H7J1 279 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 NMNAT1Q9HAN9 279 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 PRM3Q9NNZ6 103 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 PCDHB1Q9Y5F3 818 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 HCN1O60741 890 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 SLC43A1O75387 559 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 ZNF7P17097 686 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 PSMA3P25788 255 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 RPIAP49247 311 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 RPS25P62851 125 aaKnown RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 DDX39BQ13838 428 aaKnown RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 C1DQ13901 141 aaKnown RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 GALEQ14376 348 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 ZNF782Q6ZMW2 699 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 DNAJC5GQ8N7S2 189 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 KIAA1143Q96AT1 154 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 KCTD7Q96MP8 289 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 DUSP26Q9BV47 211 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 TSSK6Q9BXA6 273 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 GPR63Q9BZJ6 419 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 SLC7A5P2Q9GIP4 190 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 FLRT1Q9NZU1 646 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 STOML2Q9UJZ1 356 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 ZNF222Q9UK12 451 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 SPIN1Q9Y657 262 aaPredicted RBP13.79□□□□□ -0.2
SMG6-215ENST00000574501 AUP1Q9Y679 476 aa13.79□□□□□ -0.2
SMG6-215ENST00000574501 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 AKAP8O43823 692 aaKnown RBP13.78□□□□□ -0.2
SMG6-215ENST00000574501 NCR1O76036 304 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 APOL3O95236 402 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 PRAMEF1O95521 474 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 TRBC1P01850 177 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 ALPIP09923 528 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 PRKACAP17612 351 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 CPT1AP50416 773 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 ZNF91Q05481 1191 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 DBPQ10586 325 aaPredicted RBP13.78□□□□□ -0.2
SMG6-215ENST00000574501 MLLT11Q13015 90 aaPredicted RBP13.78□□□□□ -0.2
SMG6-215ENST00000574501 FGFBP1Q14512 234 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 AANATQ16613 207 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 ATAT1Q5SQI0 421 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 MOB2Q70IA6 237 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
SMG6-215ENST00000574501 CELF5Q8N6W0 485 aaKnown RBP13.78□□□□□ -0.2
SMG6-215ENST00000574501 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 OR11H4Q8NGC9 324 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 NFKBIDQ8NI38 313 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 UBTD2Q8WUN7 234 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 AP2M1Q96CW1 435 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 DPCDQ9BVM2 203 aaPredicted RBP13.78□□□□□ -0.2
SMG6-215ENST00000574501 ADGRE3Q9BY15 652 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
SMG6-215ENST00000574501 MARCH2Q9P0N8 246 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 SCML1Q9UN30 329 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 KCNE1BA0A087WTH5 132 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 A0A0A6YYJ9 748 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 PRAMEF33A0A0G2JMD5 474 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 C1orf226A1L170 272 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 CBX4O00257 560 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 PRAMEF10O60809 474 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 ALDH1A1P00352 501 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 HLA-DQB1P01920 261 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 ANXA5P08758 320 aa13.78□□□□□ -0.2
SMG6-215ENST00000574501 CR2P20023 1033 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms