RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ISL2Q96A47 359 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 NACC2Q96BF6 587 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 SLC7A6OSQ96CW6 309 aaPredicted RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 TCTN2Q96GX1 697 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 COL21A1Q96P44 957 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 SORT1Q99523 831 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 PRRG3Q9BZD7 231 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 C1GALT1Q9NS00 363 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 FGF21Q9NSA1 209 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 SLC39A1Q9NY26 324 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 MAGEA13PA6NCF6 341 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 SMNDC1O75940 238 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMG6-213ENST00000573166 SCELO95171 688 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 MT-ND1P03886 318 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 FHP07954 510 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 CCKBRP32239 447 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TRIM23P36406 574 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 ACADVLP49748 655 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 CLDN8P56748 225 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 OR4D2P58180 307 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TRAF3Q13114 568 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 SLCO4C1Q6ZQN7 724 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 IQCHQ86VS3 1027 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 ACOT4Q8N9L9 421 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 FAM110BQ8TC76 370 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 DAZLQ92904 295 aaKnown RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 POP5Q969H6 163 aaKnown RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 TADA1Q96BN2 335 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 AURKBQ96GD4 344 aaPredicted RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 TBL1XR1Q9BZK7 514 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 OR52A5Q9H2C5 316 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 BRF2Q9HAW0 419 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TMEM9BQ9NQ34 198 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TAS2R9Q9NYW1 312 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TEKT2Q9UIF3 430 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 MKL2Q9ULH7 1088 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 U3KQV3 271 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 GFYI3L273 518 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 SGK494L7N484 410 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 OR10H3O60404 316 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 SRPX2O60687 465 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 HNRNPCP07910 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMG6-213ENST00000573166 GSTM2P28161 218 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 CAPZA2P47755 286 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 STARD6P59095 220 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 TRIM25Q14258 630 aaKnown RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 FAM180BQ6P0A1 224 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 OR9Q1Q8NGQ5 310 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 OR56A3Q8NH54 315 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 FBXO27Q8NI29 283 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 C16orf78Q8WTQ4 265 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 KAT2AQ92830 837 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 GAL3ST3Q96A11 431 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 CCDC74AQ96AQ1 378 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 GUCD1Q96NT3 240 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 C9orf16Q9BUW7 83 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 SORBS1Q9BX66 1292 aaKnown RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 ACPTQ9BZG2 426 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 KLHL4Q9C0H6 718 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 PITHD1Q9GZP4 211 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 TMEM27Q9HBJ8 222 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 CD93Q9NPY3 652 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 LRCH1Q9Y2L9 728 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 HYKKA2RU49 373 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 OR5K3A6NET4 321 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 TLCD2A6NGC4 264 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 CXCR6O00574 342 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 IFNW1P05000 195 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 NPPBP16860 134 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 PKLRP30613 574 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 HSPA13P48723 471 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 GPLD1P80108 840 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 IHHQ14623 411 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 GALNT12Q8IXK2 581 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 LRRC25Q8N386 305 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 RASSF5Q8WWW0 418 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 EZH1Q92800 747 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 SLC47A1Q96FL8 570 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 THUMPD1Q9NXG2 353 aaKnown RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 SCN3BQ9NY72 215 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 P2RX2Q9UBL9 471 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 WDR37Q9Y2I8 494 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 AP1M2Q9Y6Q5 423 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 KLHL18O94889 574 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 T-ENOLP0DO92 83 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 MTHFD2P13995 350 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 NME1P15531 152 aaKnown RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 TEAD1P28347 426 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 ATP4BP51164 291 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 HSD11B2P80365 405 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 RABL3Q5HYI8 236 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 SHISA6Q6ZSJ9 500 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 OR5M3Q8NGP4 307 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 THAP3Q8WTV1 239 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 ZFPM2Q8WW38 1151 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 OR5P2Q8WZ92 322 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 RAB8BQ92930 207 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 LINC00615Q96LM1 132 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 LRRC61Q9BV99 259 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 SMOC1Q9H4F8 434 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms