RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 KEAP1Q14145 624 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 HLXQ14774 488 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 UAP1Q16222 522 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PTGISQ16647 500 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CA9Q16790 459 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 UGT3A2Q3SY77 523 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CDKL4Q5MAI5 379 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CLVS2Q5SYC1 327 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ZNF470Q6ECI4 717 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SIGIRRQ6IA17 410 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 RHBDD2Q6NTF9 364 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 UGT3A1Q6NUS8 523 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 VSTM1Q6UX27 236 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CYP4V2Q6ZWL3 525 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 USP50Q70EL3 339 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 LARP4Q71RC2 724 aaKnown RBP eCLIP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 LINGO2Q7L985 606 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SPRED1Q7Z699 444 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CLNKQ7Z7G1 428 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 NOXA1Q86UR1 476 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ALYREFQ86V81 257 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 TMPRSS6Q8IU80 811 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SLC35F3Q8IY50 421 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SELENOHQ8IZQ5 122 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 GABRG1Q8N1C3 465 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 RYBPQ8N488 228 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 FAM86B1Q8N7N1 296 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SNX31Q8N9S9 440 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PROKR2Q8NFJ6 384 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 GJC3Q8NFK1 279 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 BEST2Q8NFU1 509 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 VANGL1Q8TAA9 524 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 HM13Q8TCT9 377 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PHYHIPQ92561 330 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 LPAR1Q92633 364 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 GLG1Q92896 1179 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 P2RX5Q93086 422 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ADIPOR1Q96A54 375 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 FAM136AQ96C01 138 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SNF8Q96H20 258 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ZNF514Q96K75 400 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 TECTBQ96PL2 329 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SH3GL3Q99963 347 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PELOQ9BRX2 385 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ABHD14AQ9BUJ0 271 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 BDH2Q9BUT1 245 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ST6GALNAC5Q9BVH7 336 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 TEKT3Q9BXF9 490 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SLC39A8Q9C0K1 460 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SPRTNQ9H040 489 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 OR10A2Q9H208 303 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 OR51V1Q9H2C8 321 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 MCCC2Q9HCC0 563 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 LYRM4Q9HD34 91 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PAQR5Q9NXK6 330 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 DCDC2Q9UHG0 476 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ZNF639Q9UID6 485 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 NOCTQ9UK39 431 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 TNNQ9UQP3 1299 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 LRP12Q9Y561 859 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 OAS3Q9Y6K5 1087 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 POLR3AO14802 1390 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 RAD50Q92878 1312 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PLB1Q6P1J6 1458 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PPIAL4EA0A075B759 164 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TRBV11-1A0A0K0K1C0 115 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TCRBV7S3A2A0A539 114 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 MEX3AA1L020 520 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 A1L4Q6 167 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 DPPA5A6NC42 116 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 NPEPPSL1A6NEC2 478 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 GOLGA6L4A6NEF3 574 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 MGAT4DA6NG13 374 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 OR6C70A6NIJ9 312 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 DRGXA6NNA5 263 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 A8MUA0 341 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SCAMP2O15127 329 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 COCHO43405 550 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 OR1F1O43749 312 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SCO2O43819 266 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PRAMEF2O60811 474 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 MBPP02686 304 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 FCER2P06734 321 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 H2AFB2P0C5Z0 115 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PNMA6AP0CW24 399 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PPIAL4FP0DN26 164 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ITGAMP11215 1152 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ACADSP16219 412 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 HOXB8P17481 243 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TNNI1P19237 187 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 FBLN1P23142 703 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 FCARP24071 287 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 IL12BP29460 328 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PDHA2P29803 388 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SSTR1P30872 391 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 HIBADHP31937 336 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 CASP14P31944 242 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 STAT6P42226 847 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TPMTP51580 245 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms