RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CACNA1CQ13936 2221 aa5.15□□□□□ -1.59
SF3B3-214ENST00000572365 SEC16AO15027 2179 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 FRMD3A2A2Y4 597 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 ZSCAN5CA6NGD5 496 aaPredicted RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 PTGES3LE9PB15 166 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 MCF2LO15068 1137 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 SLC7A4O43246 635 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 ZSCAN12O43309 604 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 SORBS2O94875 1100 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 MOCS3O95396 460 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 AGAP20933 346 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 CD82P27701 267 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 CD1CP29017 333 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 NUDT1P36639 197 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 DLSTP36957 453 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 PPARGP37231 505 aaPredicted RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 LMAN1P49257 510 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 RPS18P62269 152 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 PRAMEP78395 509 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 MC1RQ01726 317 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 ADIGQ0VDE8 80 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 SMN1Q16637 294 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 MS4A13Q5J8X5 152 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 LRRC8EQ6NSJ5 796 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM154Q6P9G4 183 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 KLHL35Q6PF15 583 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 ERN2Q76MJ5 926 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 TAF8Q7Z7C8 310 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 FJX1Q86VR8 437 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 TDRPQ86YL5 185 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 HJURPQ8NCD3 748 aaPredicted RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 OR6K2Q8NGY2 324 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 C16orf52Q8NHV5 167 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM163Q8TC26 289 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM174Q8WUU8 243 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 FAM131CQ96AQ9 280 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM18Q96B42 140 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 DNAJC19Q96DA6 116 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 ZC3HAV1LQ96H79 300 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 RMDN2Q96LZ7 410 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 CMTM3Q96MX0 182 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 SLC25A23Q9BV35 468 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 TM6SF1Q9BZW5 370 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 LHPPQ9H008 270 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 NAT10Q9H0A0 1025 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 DPEP2Q9H4A9 486 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 ST6GALNAC4Q9H4F1 302 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 NRIP3Q9NQ35 241 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 DYRK4Q9NR20 520 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 SMYD2Q9NRG4 433 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 PANK4Q9NVE7 773 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 ZNF446Q9NWS9 450 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 MOSPD1Q9UJG1 213 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 FRMD4BQ9Y2L6 1034 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 HBS1LQ9Y450 684 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 LSM4Q9Y4Z0 139 aaKnown RBP5.14□□□□□ -1.59
SF3B3-214ENST00000572365 OR1A2Q9Y585 309 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 DOCK10Q96BY6 2186 aa5.14□□□□□ -1.59
SF3B3-214ENST00000572365 SYNJ2BP-COX16A0A087WUM0 186 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 ARGFXA6NJG6 315 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 LRRIQ3A6PVS8 624 aaPredicted RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 A8MZ25 164 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 AHCYL1O43865 530 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 STK17BO94768 372 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 OR2C1O95371 312 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 CD99P14209 185 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 PORP16435 677 aaPredicted RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 CHRNB2P17787 502 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 ITGAXP20702 1163 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 CSTF2P33240 577 aaKnown RBP eCLIP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 PEX19P40855 299 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 LEPRP48357 1165 aaKnown RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 RASSF2P50749 326 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 CDH12P55289 794 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 PFN3P60673 137 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 RPS21P63220 83 aaKnown RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 ORC2Q13416 577 aaPredicted RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 PSMD6Q15008 389 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 ESCO2Q56NI9 601 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 CXorf66Q5JRM2 361 aaPredicted RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 DCAF12Q5T6F0 453 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 TRILQ7L0X0 811 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 SZRD1Q7Z422 152 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 NOXA1Q86UR1 476 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 CCDC170Q8IYT3 715 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 RBMXL3Q8N7X1 1067 aaKnown RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 OR2A12Q8NGT7 310 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 NRGNQ92686 78 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 FBXL8Q96CD0 374 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 RTP4Q96DX8 246 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 ANKRD27Q96NW4 1050 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 SMR3AQ99954 134 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 WRAP53Q9BUR4 548 aaKnown RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 EDEM3Q9BZQ6 932 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 SPRY4Q9C004 299 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 NPFFR1Q9GZQ6 430 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 VIPAS39Q9H9C1 493 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 AKIRIN1Q9H9L7 192 aaPredicted RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 APOBEC3GQ9HC16 384 aaKnown RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 TUBA8Q9NY65 449 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms