RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 PPIEQ9UNP9 301 aaKnown RBP16.17■□□□□ 0.18
LITAF-211ENST00000572255 ZNF835Q9Y2P0 537 aa16.17■□□□□ 0.18
LITAF-211ENST00000572255 ASB1Q9Y576 335 aa16.17■□□□□ 0.18
LITAF-211ENST00000572255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
LITAF-211ENST00000572255 CYR61O00622 381 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 HNRNPRO43390 633 aaKnown RBP16.16■□□□□ 0.18
LITAF-211ENST00000572255 ASNA1O43681 348 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 ZNF24P17028 368 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 TFEBP19484 476 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 CHIT1Q13231 466 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 RCN2Q14257 317 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 TBCCQ15814 346 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
LITAF-211ENST00000572255 RNFT1Q5M7Z0 435 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 SYT10Q6XYQ8 523 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 Q6ZPB1 254 aaPredicted RBP16.16■□□□□ 0.18
LITAF-211ENST00000572255 CLNKQ7Z7G1 428 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 TBC1D1Q86TI0 1168 aaPredicted RBP16.16■□□□□ 0.18
LITAF-211ENST00000572255 ISCA2Q86U28 154 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 TICAM1Q8IUC6 712 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 SPPL2CQ8IUH8 684 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 ZNF808Q8N4W9 903 aaPredicted RBP16.16■□□□□ 0.18
LITAF-211ENST00000572255 CPSF7Q8N684 471 aaKnown RBP16.16■□□□□ 0.18
LITAF-211ENST00000572255 STAG3L4Q8TBR4 150 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 NCLNQ969V3 563 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 CSF3RQ99062 836 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 NMRAL1Q9HBL8 299 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 ADAP2Q9NPF8 381 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 PRDM7Q9NQW5 492 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 DAPP1Q9UN19 280 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 KLF2Q9Y5W3 355 aaPredicted RBP16.16■□□□□ 0.18
LITAF-211ENST00000572255 GTF3C1Q12789 2109 aa16.16■□□□□ 0.18
LITAF-211ENST00000572255 SUPT3HB4E1H0 165 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 UBXN8O00124 270 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 KERAO60938 352 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 SUPT3HO75486 399 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 ITGA10O75578 1167 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 CRABP2P29373 138 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 CASP2P42575 452 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 MSH2P43246 934 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 GPR143P51810 404 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 NAB1Q13506 487 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 E2F2Q14209 437 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 EFTUD2Q15029 972 aaKnown RBP eCLIP16.15■□□□□ 0.184e-13■□□□□ 11.1
LITAF-211ENST00000572255 ELAVL1Q15717 326 aaKnown RBP16.15■□□□□ 0.18
LITAF-211ENST00000572255 ZNF572Q7Z3I7 529 aaPredicted RBP16.15■□□□□ 0.18
LITAF-211ENST00000572255 UBE3DQ7Z6J8 389 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 GHDCQ8N2G8 530 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 KCNC2Q96PR1 638 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 ATOH8Q96SQ7 321 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 CCDC77Q9BR77 488 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 MS4A8Q9BY19 250 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 ROGDIQ9GZN7 287 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 IGSF5Q9NSI5 407 aa16.15■□□□□ 0.18
LITAF-211ENST00000572255 KLF13Q9Y2Y9 288 aaPredicted RBP16.15■□□□□ 0.18
LITAF-211ENST00000572255 NCOA6Q14686 2063 aaPredicted RBP16.15■□□□□ 0.18
LITAF-211ENST00000572255 SYNDIG1LA6NDD5 238 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 CTNSO60931 367 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 ZFAND5O76080 213 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 LTA4HP09960 611 aaKnown RBP16.14■□□□□ 0.17
LITAF-211ENST00000572255 ESRRAP11474 423 aaPredicted RBP16.14■□□□□ 0.17
LITAF-211ENST00000572255 GRNP28799 593 aaKnown RBP16.14■□□□□ 0.17
LITAF-211ENST00000572255 MEOX1P50221 254 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 ADORA2A-AS1P86434 159 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 GUCY2DQ02846 1103 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 ZNF793Q6ZN11 406 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 CYP4Z2PQ8N1L4 340 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 TMEM132CQ8N3T6 1108 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 TMEM156Q8N614 296 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 POGLUT1Q8NBL1 392 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 SRFBP1Q8NEF9 429 aaKnown RBP16.14■□□□□ 0.17
LITAF-211ENST00000572255 ZNF473Q8WTR7 871 aaKnown RBP16.14■□□□□ 0.17
LITAF-211ENST00000572255 UBTD2Q8WUN7 234 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 UBE2E3Q969T4 207 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 TBCDQ9BTW9 1192 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 LYRM4Q9HD34 91 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 PRM3Q9NNZ6 103 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 KCMF1Q9P0J7 381 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 OPTCQ9UBM4 332 aa16.14■□□□□ 0.17
LITAF-211ENST00000572255 MYOCOSA0A1B0GUC4 107 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 K7EPI3 171 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 RTCAO00442 366 aaKnown RBP16.13■□□□□ 0.17
LITAF-211ENST00000572255 ZNHIT1O43257 154 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 PRKNO60260 465 aaPredicted RBP16.13■□□□□ 0.17
LITAF-211ENST00000572255 IFNA16P05015 189 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 PCNAP12004 261 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 PRF1P14222 555 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 ABOP16442 354 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 ATP5A1P25705 553 aaKnown RBP16.13■□□□□ 0.17
LITAF-211ENST00000572255 SSR4P51571 173 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 HSF1Q00613 529 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 BMPR2Q13873 1038 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 TMEM35AQ53FP2 167 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 MED27Q6P2C8 311 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 XKRXQ6PP77 449 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 BNC2Q6ZN30 1099 aaPredicted RBP16.13■□□□□ 0.17
LITAF-211ENST00000572255 SULF2Q8IWU5 870 aa16.13■□□□□ 0.17
LITAF-211ENST00000572255 CHERPQ8IWX8 916 aaKnown RBP16.13■□□□□ 0.17
LITAF-211ENST00000572255 LAS2Q8IYD9 372 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms