RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 FAM217AQ8IXS0 508 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 OR56A3Q8NH54 315 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 OR5AK3PQ8NH89 298 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SCAMP4Q969E2 229 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 TEFMQ96QE5 360 aaKnown RBP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 OR2A14Q96R47 310 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SLC22A4Q9H015 551 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 C1GALT1Q9NS00 363 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 TMPRSS11EQ9UL52 423 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 MGAT4BQ9UQ53 548 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 PRAMEF33A0A0G2JMD5 474 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 CCDC182A6NF36 153 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 PRAMEF10O60809 474 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SLC16A8O95907 504 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 AZGP1P25311 298 aaKnown RBP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 GSTM5P46439 218 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 REEP3Q6NUK4 255 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 ADAMTS19Q8TE59 1207 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 OPALINQ96PE5 141 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SLX1AQ9BQ83 275 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 POLR2J2Q9GZM3 115 aaKnown RBP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SNX7Q9UNH6 387 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 CMAHPQ9Y471 501 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 GRM6O15303 877 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 OR10H3O60404 316 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 ENTPD6O75354 484 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 GASTP01350 101 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 OSMP13725 252 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 VIPR1P32241 457 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 DDOSTP39656 456 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 CTSOP43234 321 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 MVDP53602 400 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 LIMK1P53667 647 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SMIM11AP58511 58 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SNRPGP62308 76 aaKnown RBP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 PCDH1Q08174 1060 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SLBPQ14493 270 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 NCF4Q15080 339 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 SSX1Q16384 188 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 GPR162Q16538 588 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 DCST1Q5T197 706 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 PDZK1Q5T2W1 519 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 MTERF3Q96E29 417 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 IGSF21Q96ID5 467 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 OR4K3Q96R72 315 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 PKP4Q99569 1192 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 MYNNQ9NPC7 610 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 RHCGQ9UBD6 479 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 KLHL20Q9Y2M5 609 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 TPD52L2O43399 206 aaKnown RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TSPAN6O43657 245 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 PDE9AO76083 593 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TRAPPC2P0DI81 140 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TRAPPC2BP0DI82 140 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 CKMT1AP12532 417 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 DDX5P17844 614 aaKnown RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 PREPP48147 710 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 DMPKQ09013 629 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 FAM131AQ6UXB0 335 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 UNC5DQ6UXZ4 953 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GDPD4Q6W3E5 623 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 SLCO4C1Q6ZQN7 724 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 UTS2BQ765I0 119 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GPR151Q8TDV0 419 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 C16orf78Q8WTQ4 265 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 CIDECQ96AQ7 238 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 MARCH7Q9H992 704 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 ASAH2Q9NR71 780 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 DNAJC27Q9NZQ0 273 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 CLEC4EQ9ULY5 219 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 HS3ST2Q9Y278 367 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 HMX3A6NHT5 357 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 H3BQ06 376 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GREM1O60565 184 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 FURINP09958 794 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 IMPA1P29218 277 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 PBLDP30039 288 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 RPS19P39019 145 aaKnown RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 RPS5P46782 204 aaKnown RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 ATN1P54259 1190 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TAS2R50P59544 299 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 SLC5A12Q1EHB4 618 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 ADNP2Q6IQ32 1131 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 BRAT1Q6PJG6 821 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GALNT12Q8IXK2 581 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 KLHDC8AQ8IYD2 350 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TRAM1L1Q8N609 369 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 NEIL2Q969S2 332 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 UBE2E3Q969T4 207 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 ZSCAN5AQ9BUG6 496 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 RIOK2Q9BVS4 552 aaKnown RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TAPBPLQ9BX59 468 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TRIM39Q9HCM9 518 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 HHATLQ9HCP6 504 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GPATCH2Q9NW75 528 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TBC1D24Q9ULP9 559 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 SCN8AQ9UQD0 1980 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 CXorf51AA0A1B0GTR3 108 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 FAM25AB3EWG3 89 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 FAM25CB3EWG5 89 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms