RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MAN2A2P49641 1150 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 CDKN2DP55273 166 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 BTN3A2P78410 334 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 SLC13A2Q13183 592 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 RBM20Q5T481 1227 aaKnown RBP18.39■□□□□ 0.53
CCDC40-206ENST00000572083 WLSQ5T9L3 541 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 PAMR1Q6UXH9 720 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 FAM47EQ6ZV65 393 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 CLNKQ7Z7G1 428 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 LMNTD2Q8IXW0 634 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 AGGF1Q8N302 714 aaeCLIP18.39■□□□□ 0.53
CCDC40-206ENST00000572083 RNF10Q8N5U6 811 aaKnown RBP18.39■□□□□ 0.53
CCDC40-206ENST00000572083 FAM47BQ8NA70 645 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 SCYL1Q96KG9 808 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 SERPINB12Q96P63 405 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 LDAHQ9H6V9 325 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 IL1RL2Q9HB29 575 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 ADAP2Q9NPF8 381 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 TAS2R13Q9NYV9 303 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 ZKSCAN5Q9Y2L8 839 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 MAD1L1Q9Y6D9 718 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 MYOCOSA0A1B0GUC4 107 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 CNR1P21554 472 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 SAT1P21673 171 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 PGGT1BP53609 377 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 CCZ1BP86790 482 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 CCZ1P86791 482 aaPredicted RBP18.38■□□□□ 0.53
CCDC40-206ENST00000572083 RUNX2Q13950 521 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 FLYWCH1Q4VC44 716 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 RTL4Q6ZR62 310 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 BIVMQ86UB2 503 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 SARAFQ96BY9 339 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 MBD6Q96DN6 1003 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 FAM167BQ9BTA0 163 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 EXO5Q9H790 373 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 SPRR3Q9UBC9 169 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 B4GALT7Q9UBV7 327 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 CBLCQ9ULV8 474 aa18.38■□□□□ 0.53
CCDC40-206ENST00000572083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.37■□□□□ 0.53
CCDC40-206ENST00000572083 NRDCO43847 1150 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 SUSD5O60279 629 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 SERPINA6P08185 405 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 CCL3P10147 92 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 MLNP12872 115 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 ENDOUP21128 410 aaKnown RBP18.37■□□□□ 0.53
CCDC40-206ENST00000572083 HK2P52789 917 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 AP1S2P56377 157 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 HSD17B7P56937 341 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 FOXO1Q12778 655 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 BMPR2Q13873 1038 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 RIPPLY2Q5TAB7 128 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 HSDL2Q6YN16 418 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 CAMKMTQ7Z624 323 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 ZNF321PQ8N8H1 164 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 RELL2Q8NC24 303 aaPredicted RBP18.37■□□□□ 0.53
CCDC40-206ENST00000572083 FBXL8Q96CD0 374 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 AIF1LQ9BQI0 150 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 PELI2Q9HAT8 420 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 XAB2Q9HCS7 855 aaKnown RBP18.37■□□□□ 0.53
CCDC40-206ENST00000572083 SEMA4BQ9NPR2 832 aaPredicted RBP18.37■□□□□ 0.53
CCDC40-206ENST00000572083 SACM1LQ9NTJ5 587 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 TRMT1Q9NXH9 659 aaKnown RBP18.37■□□□□ 0.53
CCDC40-206ENST00000572083 TUBA8Q9NY65 449 aaPredicted RBP18.37■□□□□ 0.53
CCDC40-206ENST00000572083 DYRK1BQ9Y463 629 aa18.37■□□□□ 0.53
CCDC40-206ENST00000572083 ZNF354AO60765 605 aaPredicted RBP18.36■□□□□ 0.53
CCDC40-206ENST00000572083 RAF1P04049 648 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 IFNA16P05015 189 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 RAB38P57729 211 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 ELAVL1Q15717 326 aaKnown RBP18.36■□□□□ 0.53
CCDC40-206ENST00000572083 DEFB113Q30KQ7 82 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 FBXW10Q5XX13 1052 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 TAOK1Q7L7X3 1001 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCDC40-206ENST00000572083 TMEM132CQ8N3T6 1108 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 C2CD4AQ8NCU7 369 aaPredicted RBP18.36■□□□□ 0.53
CCDC40-206ENST00000572083 MAIP1Q8WWC4 291 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 ATL1Q8WXF7 558 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 FAR2Q96K12 515 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 CLCA3PQ9Y6N3 262 aa18.36■□□□□ 0.53
CCDC40-206ENST00000572083 ARHGAP21Q5T5U3 1957 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 TRGV5A0A0B4J1U4 118 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 FAM47E-STBD1D6RA91 191 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 CLDN4O14493 209 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 ERI3O43414 337 aaKnown RBP18.35■□□□□ 0.53
CCDC40-206ENST00000572083 ATE1O95260 518 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 BMP5P22003 454 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 GABRB3P28472 473 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 ADSLP30566 484 aaPredicted RBP18.35■□□□□ 0.53
CCDC40-206ENST00000572083 HNRNPH1P31943 449 aaKnown RBP18.35■□□□□ 0.53
CCDC40-206ENST00000572083 PEX19P40855 299 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 PDAP1Q13442 181 aaKnown RBP18.35■□□□□ 0.53
CCDC40-206ENST00000572083 KEAP1Q14145 624 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 SLC10A1Q14973 349 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 NXPE4Q6UWF7 544 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 THOC6Q86W42 341 aaKnown RBP18.35■□□□□ 0.53
CCDC40-206ENST00000572083 GOLM1Q8NBJ4 401 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 CCT6BQ92526 530 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 GAL3ST3Q96A11 431 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 C18orf12Q96KH6 178 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 CSF3RQ99062 836 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms