RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 GOLGA8RI6L899 631 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 E2F3O00716 465 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 MAN1A2O60476 641 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 GLRA3O75311 464 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 TGFB1P01137 390 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 ZNF10P21506 573 aaPredicted RBP13.64□□□□□ -0.23
LITAF-208ENST00000571627 TSFMP43897 325 aaKnown RBP13.64□□□□□ -0.23
LITAF-208ENST00000571627 CCT5P48643 541 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 TNFSF10P50591 281 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 MTTPP55157 894 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 RAB38P57729 211 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 TGM3Q08188 693 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 NR6A1Q15406 480 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 ZNF793Q6ZN11 406 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 CLNKQ7Z7G1 428 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 BEST3Q8N1M1 668 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 TMEM151AQ8N4L1 468 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 MREGQ8N565 214 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 M1APQ8TC57 530 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 EPS8L3Q8TE67 593 aaKnown RBP13.64□□□□□ -0.23
LITAF-208ENST00000571627 REPS1Q96D71 796 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 KCNC2Q96PR1 638 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 SERINC2Q96SA4 455 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 MTERF1Q99551 399 aaKnown RBP13.64□□□□□ -0.23
LITAF-208ENST00000571627 NPAS2Q99743 824 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 SORBS1Q9BX66 1292 aaKnown RBP13.64□□□□□ -0.23
LITAF-208ENST00000571627 NPLQ9BXD5 320 aaPredicted RBP13.64□□□□□ -0.23
LITAF-208ENST00000571627 OR51B5Q9H339 312 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 IPPKQ9H8X2 491 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 MMP25Q9NPA2 562 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 PRDM7Q9NQW5 492 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 TMEM216Q9P0N5 145 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 PCDHGA11Q9Y5H2 935 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 MYOCOSA0A1B0GUC4 107 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 A0A1W2PPM1 405 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 TLDC2A0PJX2 215 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 CLEC18AA5D8T8 446 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 A8MT66 165 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 PPP2R1BP30154 601 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 LIM2P55344 173 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 PHEXP78562 749 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 ACER2Q5QJU3 275 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 CLEC18BQ6UXF7 455 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 RPS27LQ71UM5 84 aaKnown RBP13.63□□□□□ -0.23
LITAF-208ENST00000571627 CRLF3Q8IUI8 442 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 SLC22A9Q8IVM8 553 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 SCUBE1Q8IWY4 988 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 L3MBTL4Q8NA19 623 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 CLEC18CQ8NCF0 446 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 SRFBP1Q8NEF9 429 aaKnown RBP13.63□□□□□ -0.23
LITAF-208ENST00000571627 HUS1BQ8NHY5 278 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 HAS2Q92819 552 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 ATP6V1E2Q96A05 226 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 NSUN5Q96P11 429 aaKnown RBP13.63□□□□□ -0.23
LITAF-208ENST00000571627 CDK15Q96Q40 435 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 MAPKAP1Q9BPZ7 522 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 SLC29A3Q9BZD2 475 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.63□□□□□ -0.235e-7■■□□□ 11.6
LITAF-208ENST00000571627 NOL11Q9H8H0 719 aaKnown RBP13.63□□□□□ -0.23
LITAF-208ENST00000571627 DMRT3Q9NQL9 472 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 PRTFDC1Q9NRG1 225 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 STMN3Q9NZ72 180 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 TEKT2Q9UIF3 430 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 PCTPQ9UKL6 214 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 DAPP1Q9UN19 280 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 RNF11Q9Y3C5 154 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 TSC22D4Q9Y3Q8 395 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 CLDN16Q9Y5I7 305 aa13.63□□□□□ -0.23
LITAF-208ENST00000571627 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
LITAF-208ENST00000571627 USP9YO00507 2555 aaPredicted RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 SAGE2PA6NJ88 616 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 H0YIV9 168 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 CYR61O00622 381 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 OR7A17O14581 309 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 CLDN9O95484 217 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 SBK3P0C264 359 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 ATP5F1P24539 256 aaPredicted RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 ATP5A1P25705 553 aaKnown RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 CRHR1P34998 444 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 ARL1P40616 181 aaPredicted RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 PIK3CBP42338 1070 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 SSR2P43308 183 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 CCNG1P51959 295 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 SLC13A2Q13183 592 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 UBAP2LQ14157 1087 aaKnown RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 CPSF6Q16630 551 aaKnown RBP eCLIP13.62□□□□□ -0.23
LITAF-208ENST00000571627 EIF2S3LQ2VIR3 472 aaKnown RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 TMEM35AQ53FP2 167 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 KHDRBS2Q5VWX1 349 aaKnown RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 FAM219BQ5XKK7 198 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 H3F3CQ6NXT2 135 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 SH2D5Q6ZV89 423 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 CHSY3Q70JA7 882 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 ZGRF1Q86YA3 2104 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 ACOT4Q8N9L9 421 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 ARMC2Q8NEN0 867 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 OR52B6Q8NGF0 335 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 GRHL3Q8TE85 626 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 CMTM7Q96FZ5 175 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 NTMT1Q9BV86 223 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms