RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 MED27Q6P2C8 311 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 ISCA2Q86U28 154 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 CENPLQ8N0S6 344 aaPredicted RBP12.75□□□□□ -0.37
PRPF8-202ENST00000571346 UBTD2Q8WUN7 234 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 UBE2E3Q969T4 207 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 NCLNQ969V3 563 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 TMEM125Q96AQ2 219 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 NXNL1Q96CM4 212 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 VMP1Q96GC9 406 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 FRMD6Q96NE9 622 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 QRFPRQ96P65 431 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 MS4A8Q9BY19 250 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 ADAP2Q9NPF8 381 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 ZDHHC18Q9NUE0 388 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 MTRF1LQ9UGC7 380 aaKnown RBP12.75□□□□□ -0.37
PRPF8-202ENST00000571346 ZNF490Q9ULM2 529 aaPredicted RBP12.75□□□□□ -0.37
PRPF8-202ENST00000571346 DAPP1Q9UN19 280 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 ACOT9Q9Y305 439 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
PRPF8-202ENST00000571346 NPIPA5E9PKD4 350 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 NME2P1O60361 137 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 SLC19A2O60779 497 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 ACSL3O95573 720 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 MLYCDO95822 493 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 SP1P08047 785 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 EPB42P16452 691 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 NME2P22392 152 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 MLF1P58340 268 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 STX4Q12846 297 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 TERF2Q15554 542 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 ZRSR2Q15696 482 aaKnown RBP12.74□□□□□ -0.37
PRPF8-202ENST00000571346 TBCCQ15814 346 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 WHAMMP3Q1A5X7 153 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 UBAP2Q5T6F2 1119 aaKnown RBP12.74□□□□□ -0.37
PRPF8-202ENST00000571346 SLC25A25Q6KCM7 469 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 KLC3Q6P597 504 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 ZNF793Q6ZN11 406 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.74□□□□□ -0.37
PRPF8-202ENST00000571346 ZNF595Q8IYB9 648 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 CYP4Z2PQ8N1L4 340 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 TMEM156Q8N614 296 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 CPSF7Q8N684 471 aaKnown RBP12.74□□□□□ -0.37
PRPF8-202ENST00000571346 TEX9Q8N6V9 391 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 APCDD1LQ8NCL9 501 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 NFAM1Q8NET5 270 aaPredicted RBP12.74□□□□□ -0.37
PRPF8-202ENST00000571346 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 ROGDIQ9GZN7 287 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 NINJ2Q9NZG7 142 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 CPSF2Q9P2I0 782 aaKnown RBP12.74□□□□□ -0.37
PRPF8-202ENST00000571346 NPIPA1Q9UND3 350 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 SPACA6W5XKT8 324 aa12.74□□□□□ -0.37
PRPF8-202ENST00000571346 ITPR2Q14571 2701 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 A0A096LPK6 155 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 MYOCOSA0A1B0GUC4 107 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 ASPDHA6ND91 283 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 CCL21O00585 134 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 ITGA10O75578 1167 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 C2P06681 752 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 ARL1P40616 181 aaPredicted RBP12.73□□□□□ -0.37
PRPF8-202ENST00000571346 RAP1GDS1P52306 607 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 ID2Q02363 134 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 ELAVL1Q15717 326 aaKnown RBP12.73□□□□□ -0.37
PRPF8-202ENST00000571346 PFKFB4Q16877 469 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 RNF175Q8N4F7 328 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 SRFBP1Q8NEF9 429 aaKnown RBP12.73□□□□□ -0.37
PRPF8-202ENST00000571346 ZNF473Q8WTR7 871 aaKnown RBP12.73□□□□□ -0.37
PRPF8-202ENST00000571346 CCDC120Q96HB5 630 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 GPR137Q96N19 417 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 MAPKAP1Q9BPZ7 522 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 VPS11Q9H270 941 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 ACTR8Q9H981 624 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 TINAGQ9UJW2 476 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 CLCA3PQ9Y6N3 262 aa12.73□□□□□ -0.37
PRPF8-202ENST00000571346 PRSS44E7EML9 344 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 CYR61O00622 381 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 TFECO14948 347 aaPredicted RBP12.72□□□□□ -0.37
PRPF8-202ENST00000571346 LDB3O75112 727 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 WISP2O76076 250 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 TGFB1P01137 390 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 INHBAP08476 426 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 HIST1H1TP22492 207 aaPredicted RBP12.72□□□□□ -0.37
PRPF8-202ENST00000571346 ATP5A1P25705 553 aaKnown RBP12.72□□□□□ -0.37
PRPF8-202ENST00000571346 TYK2P29597 1187 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 SERPINB1P30740 379 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 RFC3P40938 356 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 CA7P43166 264 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 HLCSP50747 726 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 HSF1Q00613 529 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 SETDB1Q15047 1291 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.72□□□□□ -0.375e-8■■□□□ 12.5
PRPF8-202ENST00000571346 AP5B1Q2VPB7 878 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 TMEM35AQ53FP2 167 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 KHDRBS2Q5VWX1 349 aaKnown RBP12.72□□□□□ -0.37
PRPF8-202ENST00000571346 GRHL2Q6ISB3 625 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 CEP128Q6ZU80 1094 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 TAOK1Q7L7X3 1001 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 CCDC91Q7Z6B0 441 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 LAS2Q8IYD9 372 aa12.72□□□□□ -0.37
PRPF8-202ENST00000571346 TMEM132CQ8N3T6 1108 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms