RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 CSAG2Q9Y5P2 127 aa11.89□□□□□ -0.51
TVP23B-204ENST00000571018 A0A1W2PPM1 405 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 ESPNB1AK53 854 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 FOXE1O00358 373 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 RTCAO00442 366 aaKnown RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 SH3BGRLO75368 114 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 TAC1P20366 129 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 HIST1H1TP22492 207 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 PTX3P26022 381 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 CCNG1P51959 295 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 SLC26A5P58743 744 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 RPS13P62277 151 aaKnown RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 PHEXP78562 749 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 TRAF3Q13114 568 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 AP5B1Q2VPB7 878 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 B3GNTL1Q67FW5 361 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 OR4C11Q6IEV9 310 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF793Q6ZN11 406 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 SH2D5Q6ZV89 423 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 CUZD1Q86UP6 607 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 TMEM52Q8NDY8 209 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF483Q8TF39 744 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 HAS2Q92819 552 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 RGMAQ96B86 450 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 CDK15Q96Q40 435 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 CENPKQ9BS16 269 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 LYRM4Q9HD34 91 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 PRM3Q9NNZ6 103 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 SEMA4BQ9NPR2 832 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 PRTFDC1Q9NRG1 225 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 TEKT2Q9UIF3 430 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 PPT2Q9UMR5 302 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 MRPS33Q9Y291 106 aaKnown RBP11.88□□□□□ -0.51
TVP23B-204ENST00000571018 CLDN16Q9Y5I7 305 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 BOD1L1Q8NFC6 3051 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 SPTA1P02549 2419 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 DOCK10Q96BY6 2186 aa11.88□□□□□ -0.51
TVP23B-204ENST00000571018 DYTNA2CJ06 578 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 SAP18O00422 153 aaKnown RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 DLX3O60479 287 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 CTNSO60931 367 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 OTCP00480 354 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 UQCRHP07919 91 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 ATP5F1P24539 256 aaPredicted RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 HSD17B3P37058 310 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 ARL1P40616 181 aaPredicted RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 SSR2P43308 183 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 SLCO1A2P46721 670 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 NEK2P51955 445 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 HNRNPFP52597 415 aaKnown RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 CDH13P55290 713 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 HERVK_113P63132 956 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 SLC13A2Q13183 592 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 CUL3Q13618 768 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 TLR1Q15399 786 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 GGTA1PQ4G0N0 100 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 C10orf62Q5T681 223 aaPredicted RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 ABHD17BQ5VST6 288 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 WDR93Q6P2C0 686 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 RPS27LQ71UM5 84 aaKnown RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 MILR1Q7Z6M3 343 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 FAM47BQ8NA70 645 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 CATSPER1Q8NEC5 780 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 OR4F6Q8NGB9 312 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 ELP5Q8TE02 316 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF354BQ96LW1 612 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 MAGEB10Q96LZ2 347 aaPredicted RBP11.87□□□□□ -0.51
TVP23B-204ENST00000571018 CSF3RQ99062 836 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 MAPKAP1Q9BPZ7 522 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 PRR14Q9BWN1 585 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 ERVK-6Q9BXR3 956 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 RNF32Q9H0A6 362 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 CLMPQ9H6B4 373 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 KCNK13Q9HB14 408 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 STMN3Q9NZ72 180 aa11.87□□□□□ -0.51
TVP23B-204ENST00000571018 BSNQ9UPA5 3926 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 A0A1B0GTL3 188 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 BLACEA4D250 179 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 SYNDIG1LA6NDD5 238 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 SAGE2PA6NJ88 616 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 A8MUI8 341 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 FOXO6A8MYZ6 492 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 TGFBR3LH3BV60 316 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 PPP6CO00743 305 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 PLPP1O14494 284 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 CDH16O75309 829 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 GLRA3O75311 464 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 KRT15P19012 456 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 IMPDH1P20839 514 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 RAP1GDS1P52306 607 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 ARG2P78540 354 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 CLCQ05315 142 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF33BQ06732 778 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 SLAMF1Q13291 335 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF169Q14929 603 aaPredicted RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 TERF2Q15554 542 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms