RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HSD17B7P56937 341 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 SLC7A5Q01650 507 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 RUNX2Q13950 521 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZRSR2Q15696 482 aaKnown RBP11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 TBCCQ15814 346 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ADPRMQ3LIE5 342 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ADNP2Q6IQ32 1131 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 CCDC91Q7Z6B0 441 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ISCA2Q86U28 154 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 SCUBE1Q8IWY4 988 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZNF595Q8IYB9 648 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 NFAM1Q8NET5 270 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 UBTD2Q8WUN7 234 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 UBE2E3Q969T4 207 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 SCMH1Q96GD3 660 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 C16orf45Q96MC5 204 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 QRFPRQ96P65 431 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 KCNC2Q96PR1 638 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 HES7Q9BYE0 225 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 DEFB126Q9BYW3 111 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ROGDIQ9GZN7 287 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 PNO1Q9NRX1 252 aaKnown RBP11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 OPTCQ9UBM4 332 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 SUCOQ9UBS9 1254 aaKnown RBP11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ASB1Q9Y576 335 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 A0A087X1B8 175 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 K7EPI3 171 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 UBXN8O00124 270 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 PRAMEF4O60810 478 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 NEURL1O76050 574 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 SP1P08047 785 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 PCNAP12004 261 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 EPORP19235 508 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 COL8A1P27658 744 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 SERPINB1P30740 379 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 CYB561P49447 251 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 CLCN2P51788 898 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 CASP6P55212 293 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 MLF1P58340 268 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 ALDH6A1Q02252 535 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 SRSF11Q05519 484 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 DLG1Q12959 904 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 BMPR2Q13873 1038 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 UAP1Q16222 522 aaPredicted RBP11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 FAM83EQ2M2I3 478 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 MROH9Q5TGP6 573 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 PRAMEF9Q5VWM5 478 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 ABHD17CQ6PCB6 329 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 CEP128Q6ZU80 1094 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 GALNTL5Q7Z4T8 443 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 SRFBP1Q8NEF9 429 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 B3GNT7Q8NFL0 401 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 KCTD4Q8WVF5 259 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 RELTQ969Z4 430 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 TMEM125Q96AQ2 219 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 MRRFQ96E11 262 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 MAGED4Q96JG8 741 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 FRMD6Q96NE9 622 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 F2RL3Q96RI0 385 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 ATOH8Q96SQ7 321 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 CSF3RQ99062 836 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 LRRC1Q9BTT6 524 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 ADAP2Q9NPF8 381 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 FBXW2Q9UKT8 454 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZNF490Q9ULM2 529 aaPredicted RBP11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 ACOT9Q9Y305 439 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 SCN3AQ9NY46 2000 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 SVILO95425 2214 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 CPAMD8Q8IZJ3 1885 aa11.55□□□□□ -0.56
CTDNEP1-205ENST00000570828 ASPDHA6ND91 283 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 URI1O94763 535 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 TBX6O95947 436 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 IFNA16P05015 189 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 GFAPP14136 432 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 EPB42P16452 691 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 TRHRP34981 398 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 DCTP40126 519 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 CASP2P42575 452 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 SERPINB8P50452 374 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 HLCSP50747 726 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 HNRNPFP52597 415 aaKnown RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 LIM2P55344 173 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 GUCY2DQ02846 1103 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 MAPKAPK3Q16644 382 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 TMEM35AQ53FP2 167 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZNF468Q5VIY5 522 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 SLC25A25Q6KCM7 469 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 MED27Q6P2C8 311 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 MTFR2Q6P444 385 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 KLC3Q6P597 504 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 CLNKQ7Z7G1 428 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 MYLK4Q86YV6 388 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 TMEM52Q8NDY8 209 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 THAP3Q8WTV1 239 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 NXNL1Q96CM4 212 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 VMP1Q96GC9 406 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 GPR137Q96N19 417 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms