RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ZFPM2Q8WW38 1151 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 CENPTQ96BT3 561 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 OR2A14Q96R47 310 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 THUMPD3Q9BV44 507 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 CXorf56Q9H5V9 222 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ECT2Q9H8V3 914 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 MAGEE1Q9HCI5 957 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 PPANQ9NQ55 473 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 TREX1Q9NSU2 369 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 OSGIN1Q9UJX0 560 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 FBXO4Q9UKT5 387 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 PLA2G4CQ9UP65 541 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 EXO1Q9UQ84 846 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ERVW-1Q9UQF0 538 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 CMAHPQ9Y471 501 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 RAI2Q9Y5P3 530 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 PIPSLA2A3N6 862 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 URADA6NGE7 173 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 SMIM23A6NLE4 172 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 ANKRD66B4E2M5 251 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 TM9SF1O15321 606 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 NKX2-2O95096 273 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 ZWINTO95229 277 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 PGLSO95336 258 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 C1QAP02745 245 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 MT-ND3P03897 115 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 CISD3P0C7P0 127 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 NR4A1P22736 598 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 PTAFRP25105 342 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 PSMA3P25788 255 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 GCAP28676 217 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 ATP6V1E1P36543 226 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 SLCO1A2P46721 670 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 ITPRIPL2Q3MIP1 535 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 SPDYAQ5MJ70 313 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 KCTD16Q68DU8 428 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 BRAT1Q6PJG6 821 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 AFTPHQ6ULP2 937 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 VITQ6UXI7 678 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 LINGO4Q6UY18 593 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 LEKR1Q6ZMV7 388 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 TIFABQ6ZNK6 161 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 GLT6D1Q7Z4J2 308 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 DSG4Q86SJ6 1040 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 FAM185AQ8N0U4 392 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 SUSD6Q92537 303 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 DNASE1L2Q92874 299 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 ECHDC3Q96DC8 303 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 PPP1R16AQ96I34 528 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 LYSMD1Q96S90 227 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 APOL2Q9BQE5 337 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 TRMT61BQ9BVS5 477 aaKnown RBP6.83□□□□□ -1.32
CNOT1-222ENST00000570139 NUF2Q9BZD4 464 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 LINC00597Q9H2U6 94 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 MFSD1Q9H3U5 465 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 EBF3Q9H4W6 596 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 TRPV5Q9NQA5 729 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 CHRAC1Q9NRG0 131 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 C20orf96Q9NUD7 363 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-222ENST00000570139 NKIRAS1Q9NYS0 192 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 CTNNAL1Q9UBT7 734 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 PPIL1Q9Y3C6 166 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 MYLKQ15746 1914 aa6.83□□□□□ -1.32
CNOT1-222ENST00000570139 MYO18AQ92614 2054 aaKnown RBP6.83□□□□□ -1.32
CNOT1-222ENST00000570139 COL4A2P08572 1712 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ANKRD36A6QL64 1941 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 A0A0J9YYE9 177 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 CENPVL1A0A0U1RR11 272 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 EDDM13A0A1B0GTR0 161 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 TSPAN11A1L157 253 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 FAM47DPA6NHR8 397 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ANHXE9PGG2 379 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 EBAG9O00559 213 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 TRAFD1O14545 582 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 LDB2O43679 373 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SHOX2O60902 331 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 TRBC1P01850 177 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 APODP05090 189 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 GSTA1P08263 222 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ZNF30P17039 623 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 OGNP20774 298 aaKnown RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 HPDP32754 393 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 HMGCLP35914 325 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 GRIA3P42263 894 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 RGRP47804 291 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SELENOPP49908 381 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SERPINB8P50452 374 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 CCT8P50990 548 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 CCNHP51946 323 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 KPNA2P52292 529 aaKnown RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 LIMK2P53671 638 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 CRADDP78560 199 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 TRAF2Q12933 501 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 MSLNQ13421 630 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 HTR4Q13639 388 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 GALNT3Q14435 633 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 DLG2Q15700 870 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 COL28A1Q2UY09 1125 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms