RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZNF793Q6ZN11 406 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 ZNF595Q8IYB9 648 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 SIRT6Q8N6T7 355 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 OR4F6Q8NGB9 312 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 PPP4R1Q8TF05 950 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 ERVK-6Q9BXR3 956 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 TRIM4Q9C037 500 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 NECTIN3Q9NQS3 549 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 PRTFDC1Q9NRG1 225 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 KCMF1Q9P0J7 381 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 PTGFRNQ9P2B2 879 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 GRID1Q9ULK0 1009 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 B3GNT3Q9Y2A9 372 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 SPACA6W5XKT8 324 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 SVILO95425 2214 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 IGKV3D-11A0A0A0MRZ8 115 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 TLDC2A0PJX2 215 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 FOXO6A8MYZ6 492 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SAP18O00422 153 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 CYR61O00622 381 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SUPT7LO94864 414 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SORBS2O94875 1100 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SCELO95171 688 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 UQCRHP07919 91 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SOX11P35716 441 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SSR2P43308 183 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 NEK2P51955 445 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 PRKAA2P54646 552 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 MLLT10P55197 1068 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SLC26A5P58743 744 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 CLCQ05315 142 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 ESPL1Q14674 2120 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 CCDC153Q494R4 210 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 UNC50Q53HI1 259 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 FRG2Q64ET8 278 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 TTC19Q6DKK2 380 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 LINC00696Q6ZRV3 163 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 Q6ZS92 163 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 RPS27LQ71UM5 84 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 RIBC1Q8N443 379 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 AMER2Q8N7J2 671 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 Q8NA96 180 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 MYRIPQ8NFW9 859 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 DNAJB14Q8TBM8 379 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 MTFMTQ96DP5 389 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 FRG2BQ96QU4 278 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 MAPKAP1Q9BPZ7 522 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 PARD6BQ9BYG5 372 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 ROPN1BQ9BZX4 212 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 ROPN1Q9HAT0 212 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 MMP25Q9NPA2 562 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
HERPUD1-218ENST00000569569 ZGRF1Q86YA3 2104 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 SPENQ96T58 3664 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 BLACEA4D250 179 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 SYNDIG1LA6NDD5 238 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 PPP6CO00743 305 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 PLPP1O14494 284 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 CTNSO60931 367 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 WISP1O95388 367 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 KRT4P19013 534 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 CRHR1P34998 444 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 HNRNPFP52597 415 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 IFFO1Q0D2I5 559 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 IFT88Q13099 833 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 SLC13A2Q13183 592 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 SLAMF1Q13291 335 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 ZCCHC7Q8N3Z6 543 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 TMEM52Q8NDY8 209 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 OR2W6PQ8NHA6 318 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 CPT1CQ8TCG5 803 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 TRPC4APQ8TEL6 797 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 HAS2Q92819 552 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 CCDC126Q96EE4 140 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 L3HYPDHQ96EM0 354 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 TMEM237Q96Q45 408 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 CSF3RQ99062 836 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 SERPINI1Q99574 410 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 ILKAPQ9H0C8 392 aaPredicted RBP12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 MS4A12Q9NXJ0 267 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 STMN3Q9NZ72 180 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 LUZP4Q9P127 313 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 FBXW2Q9UKT8 454 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 EMCNQ9ULC0 261 aa12.95□□□□□ -0.34
HERPUD1-218ENST00000569569 A0A1B0GTL3 188 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 DYTNA2CJ06 578 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 SAGE2PA6NJ88 616 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 A8MUI8 341 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 G3V2L1 256 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 PYCARD-AS1I3L0S3 204 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 COPEO14579 308 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 ETHE1O95571 254 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 TUBBP07437 444 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 MYL2P10916 166 aa12.94□□□□□ -0.34
HERPUD1-218ENST00000569569 TSPAN8P19075 237 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms