RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 TEX35Q5T0J7 233 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 KHDRBS2Q5VWX1 349 aaKnown RBP9.72□□□□□ -0.85
UBR1-207ENST00000568782 FCRLBQ6BAA4 426 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 OR4C11Q6IEV9 310 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 H3F3CQ6NXT2 135 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 CYP20A1Q6UW02 462 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 CRLF3Q8IUI8 442 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 BEST3Q8N1M1 668 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 TMEM156Q8N614 296 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 FAM47BQ8NA70 645 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 B3GNT7Q8NFL0 401 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 ZNF473Q8WTR7 871 aaKnown RBP9.72□□□□□ -0.85
UBR1-207ENST00000568782 PHF21BQ96EK2 531 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 VMP1Q96GC9 406 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 MRPL57Q9BQC6 102 aaKnown RBP9.72□□□□□ -0.85
UBR1-207ENST00000568782 MS4A8Q9BY19 250 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 MRPL46Q9H2W6 279 aaKnown RBP9.72□□□□□ -0.85
UBR1-207ENST00000568782 WDR41Q9HAD4 459 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 ADAP2Q9NPF8 381 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 AHSPQ9NZD4 102 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 PHF11Q9UIL8 331 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 FBXW2Q9UKT8 454 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 SLC5A6Q9Y289 635 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 PCDHGB6Q9Y5F9 930 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 DOPEY2Q9Y3R5 2298 aa9.72□□□□□ -0.85
UBR1-207ENST00000568782 TENM4Q6N022 2769 aa9.71□□□□□ -0.85
UBR1-207ENST00000568782 PRRC2CQ9Y520 2896 aaKnown RBP9.71□□□□□ -0.85
UBR1-207ENST00000568782 ARHGAP10A1A4S6 786 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 GABRR3A8MPY1 467 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 STX16-NPEPL1H3BU86 382 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 STX16O14662 325 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 KLK8O60259 260 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 CTNSO60931 367 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 DNAJB6O75190 326 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 SH3BGRLO75368 114 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 ABHD2P08910 425 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 MTHFD2P13995 350 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 HIST1H1TP22492 207 aaPredicted RBP9.71□□□□□ -0.86
UBR1-207ENST00000568782 GMPRP36959 345 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 ARFIP1P53367 373 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 IFT88Q13099 833 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 SLAMF1Q13291 335 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 RUNX2Q13950 521 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 OR1C1Q15619 314 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 TECRLQ5HYJ1 363 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 C10orf62Q5T681 223 aaPredicted RBP9.71□□□□□ -0.86
UBR1-207ENST00000568782 DEPDC1Q5TB30 811 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 GOLGA7Q7Z5G4 137 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 LCA5Q86VQ0 697 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 PTGR2Q8N8N7 351 aaPredicted RBP9.71□□□□□ -0.86
UBR1-207ENST00000568782 ACOT4Q8N9L9 421 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 HUS1BQ8NHY5 278 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 ELP5Q8TE02 316 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 RBM18Q96H35 190 aaKnown RBP9.71□□□□□ -0.86
UBR1-207ENST00000568782 MTERF1Q99551 399 aaKnown RBP9.71□□□□□ -0.86
UBR1-207ENST00000568782 ALOXE3Q9BYJ1 711 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 NECTIN3Q9NQS3 549 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 PRDM7Q9NQW5 492 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 NMRK1Q9NWW6 199 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 LRFN1Q9P244 771 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 COPS7AQ9UBW8 275 aa9.71□□□□□ -0.86
UBR1-207ENST00000568782 CROCCQ5TZA2 2017 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 TRBV11-1A0A0K0K1C0 115 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 A0A1B0GUH1 482 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 HMX2A2RU54 273 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 H0YIV9 168 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 SAP18O00422 153 aaKnown RBP9.7□□□□□ -0.86
UBR1-207ENST00000568782 RIPK2O43353 540 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 ZFAND5O76080 213 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 OTCP00480 354 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 EPORP19235 508 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 CD22P20273 847 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 ATP5A1P25705 553 aaKnown RBP9.7□□□□□ -0.86
UBR1-207ENST00000568782 CD96P40200 585 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 EFNA3P52797 238 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 SRSF11Q05519 484 aaKnown RBP9.7□□□□□ -0.86
UBR1-207ENST00000568782 TUBA3CQ13748 450 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 E2F2Q14209 437 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 ELAVL1Q15717 326 aaKnown RBP9.7□□□□□ -0.86
UBR1-207ENST00000568782 MAPKAPK3Q16644 382 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 SLC25A25Q6KCM7 469 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 TUBA3EQ6PEY2 450 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 GFRALQ6UXV0 394 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 PAGE2Q7Z2X7 111 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 MILR1Q7Z6M3 343 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 CLNKQ7Z7G1 428 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 GPR180Q86V85 440 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 SCUBE1Q8IWY4 988 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 MORN4Q8NDC4 146 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 OR14A16Q8NHC5 309 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 DCAKDQ8WVC6 231 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 NR4A3Q92570 626 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 TANKQ92844 425 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 ART5Q96L15 291 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 QRFPRQ96P65 431 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 DGAT2Q96PD7 388 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 SERPINI1Q99574 410 aa9.7□□□□□ -0.86
UBR1-207ENST00000568782 BARD1Q99728 777 aaKnown RBP9.7□□□□□ -0.86
UBR1-207ENST00000568782 OR51B5Q9H339 312 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms