RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 RAB38P57729 211 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 AP2B1P63010 937 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 TMEM35AQ53FP2 167 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 LCA5Q86VQ0 697 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 CNPY4Q8N129 248 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 L3MBTL4Q8NA19 623 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 OR52B6Q8NGF0 335 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 OR1N1Q8NGS0 311 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 M1APQ8TC57 530 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 GRHL3Q8TE85 626 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 CDK15Q96Q40 435 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 MTERF1Q99551 399 aaKnown RBP23.59■■□□□ 1.37
FANCA-228ENST00000567943 LPAR4Q99677 370 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 SLC29A3Q9BZD2 475 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 RNF32Q9H0A6 362 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 OR51B5Q9H339 312 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 ZBTB26Q9HCK0 441 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 MMP25Q9NPA2 562 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 NECTIN3Q9NQS3 549 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 PRDM9Q9NQV7 894 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 CLDN16Q9Y5I7 305 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 SPTBN1Q01082 2364 aaKnown RBP23.58■■□□□ 1.37
FANCA-228ENST00000567943 DYTNA2CJ06 578 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 A8MUI8 341 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 H0YIV9 168 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 SAP18O00422 153 aaKnown RBP23.58■■□□□ 1.37
FANCA-228ENST00000567943 CLDN9O95484 217 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 RNF224P0DH78 156 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 PIK3CBP42338 1070 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 EXT1Q16394 746 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 KHDRBS2Q5VWX1 349 aaKnown RBP23.58■■□□□ 1.37
FANCA-228ENST00000567943 RPUSD3Q6P087 351 aaKnown RBP23.58■■□□□ 1.37
FANCA-228ENST00000567943 RPS27LQ71UM5 84 aaKnown RBP23.58■■□□□ 1.37
FANCA-228ENST00000567943 CYP4X1Q8N118 509 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 FAM47BQ8NA70 645 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 TMEM52Q8NDY8 209 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 REPS1Q96D71 796 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 MAGEB10Q96LZ2 347 aaPredicted RBP23.58■■□□□ 1.37
FANCA-228ENST00000567943 TBCDQ9BTW9 1192 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 ROGDIQ9GZN7 287 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 DMRT3Q9NQL9 472 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 STMN3Q9NZ72 180 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 TSC22D4Q9Y3Q8 395 aa23.58■■□□□ 1.37
FANCA-228ENST00000567943 ICE1Q9Y2F5 2266 aa23.58■■□□□ 1.36
FANCA-228ENST00000567943 A0A1W2PPM1 405 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 TCRBV16S1A1N1A0A5B0 115 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 FOXO6A8MYZ6 492 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 TGFBR3LH3BV60 316 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 RPS17P08708 135 aaKnown RBP23.57■■□□□ 1.36
FANCA-228ENST00000567943 TAC1P20366 129 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 HSD17B3P37058 310 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 HNRNPFP52597 415 aaKnown RBP23.57■■□□□ 1.36
FANCA-228ENST00000567943 LIM2P55344 173 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 SLC26A5P58743 744 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 RPS13P62277 151 aaKnown RBP23.57■■□□□ 1.36
FANCA-228ENST00000567943 ZNF33BQ06732 778 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 ZRSR2Q15696 482 aaKnown RBP23.57■■□□□ 1.36
FANCA-228ENST00000567943 DEPDC1Q5TB30 811 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 ABHD17BQ5VST6 288 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 ZNF793Q6ZN11 406 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 ADAMTS18Q8TE60 1221 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 EPS8L3Q8TE67 593 aaKnown RBP23.57■■□□□ 1.36
FANCA-228ENST00000567943 TAAR6Q96RI8 345 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 PPCSQ9HAB8 311 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 KCNK13Q9HB14 408 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 SEMA4BQ9NPR2 832 aaPredicted RBP23.57■■□□□ 1.36
FANCA-228ENST00000567943 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.57■■□□□ 1.369e-7■□□□□ 10
FANCA-228ENST00000567943 DAPP1Q9UN19 280 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 MMACHCQ9Y4U1 282 aa23.57■■□□□ 1.36
FANCA-228ENST00000567943 V9GYY5 206 aaPredicted RBP23.57■■□□□ 1.36
FANCA-228ENST00000567943 ATP5A1P25705 553 aaKnown RBP23.56■■□□□ 1.36
FANCA-228ENST00000567943 SSR2P43308 183 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 ST13P50502 369 aaKnown RBP23.56■■□□□ 1.36
FANCA-228ENST00000567943 PHEXP78562 749 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 AP5B1Q2VPB7 878 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 ACER2Q5QJU3 275 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 FHL5Q5TD97 284 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 TDRPQ86YL5 185 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 CRLF3Q8IUI8 442 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 KIF2BQ8N4N8 673 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 ACOT4Q8N9L9 421 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 ARMC2Q8NEN0 867 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 NFAM1Q8NET5 270 aaPredicted RBP23.56■■□□□ 1.36
FANCA-228ENST00000567943 ELP5Q8TE02 316 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 PSMG3-AS1Q96PY0 264 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 CSF3RQ99062 836 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 NTMT1Q9BV86 223 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 PRTFDC1Q9NRG1 225 aa23.56■■□□□ 1.36
FANCA-228ENST00000567943 MRPS33Q9Y291 106 aaKnown RBP23.56■■□□□ 1.36
FANCA-228ENST00000567943 TRAV17A0A0B4J275 112 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 OR5H15A6NDH6 313 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 CLDN4O14493 209 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 GSTA1P08263 222 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 KRT15P19012 456 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 HIST1H1TP22492 207 aaPredicted RBP23.55■■□□□ 1.36
FANCA-228ENST00000567943 NEK2P51955 445 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 RAP1GDS1P52306 607 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 CDH13P55290 713 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 TRAF3Q13114 568 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 RCN2Q14257 317 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms