RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	FCRLB	Q6BAA4	426 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	GTF2H2C	Q6P1K8	395 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	TUBA3E	Q6PEY2	450 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	ZNF793	Q6ZN11	406 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	RPS19BP1	Q86WX3	136 aa	Known RBP	12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	ARMC10	Q8N2F6	343 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	TMEM52	Q8NDY8	209 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	PRR7	Q8TB68	274 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	PSMG3-AS1	Q96PY0	264 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	TAAR6	Q96RI8	345 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	OLAH	Q9NV23	265 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	ZNF358	Q9NW07	568 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	KCMF1	Q9P0J7	381 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	PPIE	Q9UNP9	301 aa	Known RBP	12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	PCDHGA11	Q9Y5H2	935 aa		12.96	□□□□□ -0.33
PKD1-231	ENST00000566784	UTP20	O75691	2785 aa	Known RBP	12.96	□□□□□ -0.34
PKD1-231	ENST00000566784	BLACE	A4D250	179 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	LRRC14B	A6NHZ5	514 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	TRIM49D1	C9J1S8	452 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	STX16-NPEPL1	H3BU86	382 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	TGFBR3L	H3BV60	316 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	STX16	O14662	325 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	TGFB1	P01137	390 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	SNRPA	P09012	282 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	HIST1H1T	P22492	207 aa	Predicted RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	ATP5A1	P25705	553 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	HNRNPF	P52597	415 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	SLC13A2	Q13183	592 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	AP5B1	Q2VPB7	878 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	ZNF766	Q5HY98	468 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	DEPDC1	Q5TB30	811 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	LGSN	Q5TDP6	509 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	GOLGA7	Q7Z5G4	137 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	KIF2B	Q8N4N8	673 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	ACOT4	Q8N9L9	421 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	L3MBTL4	Q8NA19	623 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	FAM47B	Q8NA70	645 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	APCDD1L	Q8NCL9	501 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	MDS2	Q8NDY4	140 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	B3GNT7	Q8NFL0	401 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	DNAJB8	Q8NHS0	232 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	HUS1B	Q8NHY5	278 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	UHMK1	Q8TAS1	419 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	SSC4D	Q8WTU2	575 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	REPS1	Q96D71	796 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	CSF3R	Q99062	836 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	MRPL57	Q9BQC6	102 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	UTP23	Q9BRU9	249 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	CENPK	Q9BS16	269 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	IPPK	Q9H8X2	491 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	ACTR8	Q9H981	624 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	ADAP2	Q9NPF8	381 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	XPR1	Q9UBH6	696 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	SPACA6	W5XKT8	324 aa		12.95	□□□□□ -0.34
PKD1-231	ENST00000566784	NAV2	Q8IVL1	2488 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	GABRR3	A8MPY1	467 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784		A8MUA0	341 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	RIPK2	O43353	540 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	MAN1A2	O60476	641 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	CTNS	O60931	367 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	SMIM24	O75264	130 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	MYO1D	O94832	1006 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	RASAL1	O95294	804 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	SIX3	O95343	332 aa	Predicted RBP	12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	CRYAB	P02511	175 aa	Known RBP	12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	RHOXF2B	P0C7M4	288 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	CD96	P40200	585 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	CLCN2	P51788	898 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	TDGF1P3	P51864	188 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	MLF1	P58340	268 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	PHEX	P78562	749 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	OR1C1	Q15619	314 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	OR4C11	Q6IEV9	310 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	ADGRD1	Q6QNK2	874 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	TIFAB	Q6ZNK6	161 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	MYLK4	Q86YV6	388 aa	Predicted RBP	12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	CNPY4	Q8N129	248 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	HORMAD2	Q8N7B1	307 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	C7orf57	Q8NEG2	295 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	NR4A3	Q92570	626 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	RGMA	Q96B86	450 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	MTBP	Q96DY7	904 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	SCMH1	Q96GD3	660 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	SCYL1	Q96KG9	808 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	MAPKAP1	Q9BPZ7	522 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	RHOXF2	Q9BQY4	288 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	DEFB126	Q9BYW3	111 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	MRPL46	Q9H2W6	279 aa	Known RBP	12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	CDCP1	Q9H5V8	836 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	PRM3	Q9NNZ6	103 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	DMRT3	Q9NQL9	472 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	PNO1	Q9NRX1	252 aa	Known RBP	12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	PSD3	Q9NYI0	1048 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	PPT2	Q9UMR5	302 aa		12.94	□□□□□ -0.34
PKD1-231	ENST00000566784	RTCA	O00442	366 aa	Known RBP	12.93	□□□□□ -0.34
PKD1-231	ENST00000566784	CLDN9	O95484	217 aa		12.93	□□□□□ -0.34
PKD1-231	ENST00000566784	DDAH2	O95865	285 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms