RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KRT3P12035 628 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 FCGR1AP12314 374 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 POLR2CP19387 275 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 DPP4P27487 766 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 HTR2AP28223 471 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 NMT1P30419 496 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 DUTP33316 252 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RDXP35241 583 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 MPLP40238 635 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 GRIA1P42261 906 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 CEBPDP49716 269 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ENTPD1P49961 510 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 PGGT1BP53609 377 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SELENOVP59797 346 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ISL1P61371 349 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RPS8P62241 208 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RPS18P62269 152 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 BLOC1S1P78537 153 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 MRPS21P82921 87 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 DGCR2P98153 550 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ACY1Q03154 408 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF91Q05481 1191 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 EEF1A2Q05639 463 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ZBTB17Q13105 803 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 EXOSC2Q13868 293 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 GPR18Q14330 331 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 KRT81Q14533 505 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 EXOSC7Q15024 291 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SSX2Q16385 188 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ODF4Q2M2E3 257 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 EXOC3L2Q2M3D2 409 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 AMZ1Q400G9 498 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF311Q5JNZ3 666 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SPDYCQ5MJ68 293 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 C10orf120Q5SQS8 335 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 PRAMEF5Q5TYX0 476 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 LYPLAL1Q5VWZ2 237 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 PRAMEF6Q5VXH4 476 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 HIST2H2AA3Q6FI13 130 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RTL6Q6ICC9 239 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 NIPAL3Q6P499 406 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 KCNIP4Q6PIL6 250 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF841Q6ZN19 808 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 C17orf107Q6ZR85 190 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 CDHR3Q6ZTQ4 885 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 Q75L30 129 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 GPR141Q7Z602 305 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 LDLRAD3Q86YD5 345 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF444Q8N0Y2 327 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 CPSF7Q8N684 471 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 PPFIBP2Q8ND30 876 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 OR9K2Q8NGE7 335 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 OR4C15Q8NGM1 316 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 OR4L1Q8NH43 312 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RAB3IL1Q8TBN0 382 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM174Q8WUU8 243 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 DNAJA4Q8WW22 397 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 PHF21AQ96BD5 680 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RHOXF2Q9BQY4 288 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 C11orf70Q9BRQ4 267 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM43Q9BTV4 400 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ROPN1BQ9BZX4 212 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 DCLK3Q9C098 648 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 LRRCC1Q9C099 1032 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 MIS12Q9H081 205 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SDCBP2Q9H190 292 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 GANQ9H2C0 597 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ACTL8Q9H568 366 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 C5orf66Q9H5L9 145 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 C10orf88Q9H8K7 445 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 COG4Q9H9E3 785 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 UBTD1Q9HAC8 227 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ELOVL3Q9HB03 270 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 APMAPQ9HDC9 416 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC52A3Q9NQ40 469 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 TCF7L2Q9NQB0 619 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 PDGFCQ9NRA1 345 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RNF186Q9NXI6 227 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 MSRB1Q9NZV6 116 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 FOXJ2Q9P0K8 574 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ERVK-18Q9QC07 812 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 P2RX2Q9UBL9 471 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SUN2Q9UH99 717 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 TEKT2Q9UIF3 430 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 B9D1Q9UPM9 204 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 STK38LQ9Y2H1 464 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 DMRT1Q9Y5R6 373 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 KIF7Q2M1P5 1343 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ATXN2Q99700 1313 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 A0A1W2PN81 502 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 HEATR9A2RTY3 570 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 MBLAC1A4D2B0 266 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM191CA6NGB0 347 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PCP4L1A6NKN8 68 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 C15orf62A8K5M9 175 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 BECN2A8MW95 431 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 HNRNPCL2B2RXH8 293 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SUPT3HB4E1H0 165 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PPIAL4DF5H284 164 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SPECC1L-ADORA2AF8WAN1 911 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms