RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 DDX31Q9H8H2 851 aaKnown RBP24.51■■□□□ 1.51
NME3-208ENST00000565379 MKKSQ9NPJ1 570 aaPredicted RBP24.51■■□□□ 1.51
NME3-208ENST00000565379 ZNF282Q9UDV7 671 aaPredicted RBP24.51■■□□□ 1.51
NME3-208ENST00000565379 KCND3Q9UK17 655 aa24.51■■□□□ 1.51
NME3-208ENST00000565379 NXT1Q9UKK6 140 aaKnown RBP24.51■■□□□ 1.51
NME3-208ENST00000565379 PADI2Q9Y2J8 665 aa24.51■■□□□ 1.51
NME3-208ENST00000565379 MAU2Q9Y6X3 613 aa24.51■■□□□ 1.51
NME3-208ENST00000565379 TMEM233B4DJY2 109 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 SGK494L7N484 410 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 ITGAXP20702 1163 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 ATP5A1P25705 553 aaKnown RBP24.5■■□□□ 1.51
NME3-208ENST00000565379 LCN10Q6JVE6 187 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 PRSS41Q7RTY9 318 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 DDIASQ8IXT1 998 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 AMER3Q8N944 861 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 PIWIL2Q8TC59 973 aaKnown RBP24.5■■□□□ 1.51
NME3-208ENST00000565379 HBEGFQ99075 208 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 ADNPQ9H2P0 1102 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 TUBB1Q9H4B7 451 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 CCDC134Q9H6E4 229 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 WDR54Q9H977 334 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 LYRM4Q9HD34 91 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 C14orf105Q9NVL8 296 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 RIC8BQ9NVN3 520 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 SIRT5Q9NXA8 310 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 SEC16AO15027 2179 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 NBASA2RRP1 2371 aa24.5■■□□□ 1.51
NME3-208ENST00000565379 IGLV3-12A0A075B6K2 115 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 C4orf51C9J302 202 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 SAP18O00422 153 aaKnown RBP24.49■■□□□ 1.51
NME3-208ENST00000565379 PIP5K1BO14986 540 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 SH3BGRLO75368 114 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 BSGP35613 385 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 MDH1P40925 334 aaKnown RBP24.49■■□□□ 1.51
NME3-208ENST00000565379 RPS15P62841 145 aaKnown RBP24.49■■□□□ 1.51
NME3-208ENST00000565379 OCA2Q04671 838 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 TBL3Q12788 808 aaKnown RBP24.49■■□□□ 1.51
NME3-208ENST00000565379 COLEC12Q5KU26 742 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 MRPL14Q6P1L8 145 aaKnown RBP24.49■■□□□ 1.51
NME3-208ENST00000565379 SCIMPQ6UWF3 145 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 METTL27Q8N6F8 245 aaPredicted RBP24.49■■□□□ 1.51
NME3-208ENST00000565379 ACOT4Q8N9L9 421 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 CHTF18Q8WVB6 975 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 CATSPER2Q96P56 530 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 TGIF2Q9GZN2 237 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 ZNF71Q9NQZ8 489 aaPredicted RBP24.49■■□□□ 1.51
NME3-208ENST00000565379 MS4A12Q9NXJ0 267 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 SPACA6W5XKT8 324 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 HECTD1Q9ULT8 2610 aa24.49■■□□□ 1.51
NME3-208ENST00000565379 ARHGAP10A1A4S6 786 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 CDC14CA4D256 554 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 TRPC5OSA6NMA1 111 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 HDAC3O15379 428 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 RDH16O75452 317 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 LINC00032P0C843 101 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 SNRPNP63162 240 aaKnown RBP24.48■■□□□ 1.51
NME3-208ENST00000565379 HMGCS1Q01581 520 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 ACSM2AQ08AH3 577 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 NCF4Q15080 339 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 XKR7Q5GH72 579 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 SPDYAQ5MJ70 313 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 FAM69BQ5VUD6 431 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 ACSM2BQ68CK6 577 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 FAM198BQ6UWH4 519 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 COX15Q7KZN9 410 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 LRRC34Q8IZ02 419 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 C19orf60Q96EN9 201 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 PPP3R2Q96LZ3 170 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 OR1F2PQ96R84 312 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 ZNF717Q9BY31 904 aaPredicted RBP24.48■■□□□ 1.51
NME3-208ENST00000565379 MRPL1Q9BYD6 325 aaKnown RBP24.48■■□□□ 1.51
NME3-208ENST00000565379 ACTL8Q9H568 366 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 SLC22A11Q9NSA0 550 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 PNPOQ9NVS9 261 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 C1orf109Q9NX04 203 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 LYARQ9NX58 379 aaKnown RBP24.48■■□□□ 1.51
NME3-208ENST00000565379 TRPC4Q9UBN4 977 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 TMED5Q9Y3A6 229 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 CCL27Q9Y4X3 112 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 PCDHGA6Q9Y5G7 932 aa24.48■■□□□ 1.51
NME3-208ENST00000565379 VPS4BO75351 444 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 GSTM5P46439 218 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 SLC9A5Q14940 896 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 MLIPQ5VWP3 458 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 GALNT18Q6P9A2 607 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 MED25Q71SY5 747 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 COMMD6Q7Z4G1 85 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 WDR75Q8IWA0 830 aaKnown RBP24.47■■□□□ 1.51
NME3-208ENST00000565379 DTWD1Q8N5C7 304 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 OR51Q1Q8NH59 317 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.47■■□□□ 1.51
NME3-208ENST00000565379 YIPF2Q9BWQ6 316 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 MAST4O15021 2626 aa24.47■■□□□ 1.51
NME3-208ENST00000565379 A0A0A6YYD5 115 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 A0A0G2JN53 185 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 BLACEA4D250 179 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 VSTM2BA6NLU5 285 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 K7EM74 188 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 PSMD12O00232 456 aaPredicted RBP24.46■■□□□ 1.51
NME3-208ENST00000565379 RTCAO00442 366 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms