RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PADI2Q9Y2J8 665 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SPIN1Q9Y657 262 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TRBC2A0A5B9 178 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 VNN2O95498 520 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 POLR2EP19388 210 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAPQ12884 760 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 VEZF1Q14119 521 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 KRT73Q86Y46 540 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ACOXLQ9NUZ1 547 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 HCN4Q9Y3Q4 1203 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 A0A1B0GVM2 712 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TLR4O00206 839 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ZNF780AO75290 641 aaPredicted RBP19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 STC2O76061 302 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ENDOUP21128 410 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ETV6P41212 452 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RTP2Q5QGT7 225 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TYW3Q6IPR3 259 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PRR23CQ6ZRP0 262 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 VN1R5Q7Z5H4 357 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 VWA5B2Q8N398 1253 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TRPV1Q8NER1 839 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 VPS37AQ8NEZ2 397 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MYLIPQ8WY64 445 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ARHGAP39Q9C0H5 1083 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SLA2Q9H6Q3 261 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 GALNT9Q9HCQ5 603 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MCUBQ9NWR8 336 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ALG5Q9Y673 324 aa19.61■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SLC35F4A4IF30 521 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SLC38A8A6NNN8 435 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TLX2O43763 284 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SH3BP5O60239 455 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RING1Q06587 406 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TMEM173Q86WV6 379 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR4C15Q8NGM1 316 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OTUB1Q96FW1 271 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 UCKL1Q9NWZ5 548 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 KCTD5Q9NXV2 234 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TMEM202A6NGA9 273 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 POM121L1PQ3SYA9 428 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ATAT1Q5SQI0 421 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TNFAIP8L2Q6P589 184 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 DEF8Q6ZN54 512 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RACGAP1Q9H0H5 632 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAM120CQ9NX05 1096 aaKnown RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SPEF1Q9Y4P9 236 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SCAMP2O15127 329 aaKnown RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR2B3O76000 313 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 POU3F3P20264 500 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ATN1P54259 1190 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SLC5A12Q1EHB4 618 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SZRD1Q7Z422 152 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PDZD3Q86UT5 571 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR4M1Q8NGD0 313 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 GATAD2BQ8WXI9 593 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TRIM63Q969Q1 353 aa19.6■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MYL12BO14950 172 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ARHGEF9O43307 516 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TGFB1P01137 390 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SCG5P05408 212 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NAT2P11245 290 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CYP2A6P11509 494 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 LRRC32Q14392 662 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 EIF4HQ15056 248 aaKnown RBP19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SERINC5Q86VE9 423 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 C2orf73Q8N5S3 287 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RAB8BQ92930 207 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SCAMP4Q969E2 229 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 WFDC6Q9BQY6 131 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CDCA4Q9BXL8 241 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TXNL4BQ9NX01 149 aaKnown RBP19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 A0A075B6Q4 140 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RPS13P62277 151 aaKnown RBP19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TPGS1Q6ZTW0 290 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR8H1Q8NGG4 311 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 GRPEL2Q8TAA5 225 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 GDF15Q99988 308 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TAPBPLQ9BX59 468 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TSSK6Q9BXA6 273 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAM83DQ9H4H8 585 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TRIM45Q9H8W5 580 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 C3orf14Q9HBI5 128 aa19.59■□□□□ 0.73
MAP1LC3B-206ENST00000564844 C1orf226A1L170 272 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FZD6O60353 706 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PLOD3O60568 738 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 IDSP22304 550 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PBLDP30039 288 aaPredicted RBP19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SPAM1P38567 509 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PREPP48147 710 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PFN3P60673 137 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CDK6Q00534 326 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SEC23BQ15437 767 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CRTC2Q53ET0 693 aaPredicted RBP19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 C19orf18Q8NEA5 215 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR8J2Q8NGG1 315 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PHF21AQ96BD5 680 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TTLL2Q9BWV7 592 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SORBS1Q9BX66 1292 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms