RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 NME2P1O60361 137 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 ACSL3O95573 720 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 NME2P22392 152 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 HPDP32754 393 aaPredicted RBP17.28■□□□□ 0.36
CLN6-204ENST00000564752 TRHRP34981 398 aaPredicted RBP17.28■□□□□ 0.36
CLN6-204ENST00000564752 CYB561P49447 251 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 SERPINB8P50452 374 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 IRF9Q00978 393 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 MAPKAPK3Q16644 382 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 PAGE2BQ5JRK9 111 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 UBAP2Q5T6F2 1119 aaKnown RBP17.28■□□□□ 0.36
CLN6-204ENST00000564752 ZNF227Q86WZ6 799 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 CA13Q8N1Q1 262 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 ARMC10Q8N2F6 343 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 KIF18AQ8NI77 898 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 KCTD4Q8WVF5 259 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 NXNL1Q96CM4 212 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 FAR2Q96K12 515 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 EFCAB11Q9BUY7 163 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 CD244Q9BZW8 370 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 RHBGQ9H310 441 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 PCNX1Q96RV3 2341 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 OTOGQ6ZRI0 2925 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 A0A088AWK7 358 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 SYCE1LA8MT33 242 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 A8MUA0 341 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 ERI3O43414 337 aaKnown RBP17.27■□□□□ 0.36
CLN6-204ENST00000564752 CLEC3AO75596 197 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 C2P06681 752 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 ZNF10P21506 573 aaPredicted RBP17.27■□□□□ 0.36
CLN6-204ENST00000564752 HNRNPH1P31943 449 aaKnown RBP17.27■□□□□ 0.36
CLN6-204ENST00000564752 PTGER4P35408 488 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 KCNC1P48547 511 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 HLCSP50747 726 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 SMSP52788 366 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 IRF8Q02556 426 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 DOC2AQ14183 400 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 FAM83EQ2M2I3 478 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 RNFT1Q5M7Z0 435 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 CENPLQ8N0S6 344 aaPredicted RBP17.27■□□□□ 0.36
CLN6-204ENST00000564752 GHDCQ8N2G8 530 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 ARMC2Q8NEN0 867 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 UBTD2Q8WUN7 234 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 TRIM44Q96DX7 344 aaPredicted RBP17.27■□□□□ 0.36
CLN6-204ENST00000564752 WDR34Q96EX3 536 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 DEFB126Q9BYW3 111 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 OPTCQ9UBM4 332 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 MEMO1Q9Y316 297 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 ASB1Q9Y576 335 aa17.27■□□□□ 0.36
CLN6-204ENST00000564752 A0A096LPK6 155 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 A0A0G2JN53 185 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 HMX2A2RU54 273 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 LRIT2A6NDA9 550 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 PRAMEF4O60810 478 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 INHBAP08476 426 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 EPORP19235 508 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 CD22P20273 847 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 TYK2P29597 1187 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 BTN3A2P78410 334 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 CHIT1Q13231 466 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 LAPTM5Q13571 262 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 HIST2H2ACQ16777 129 aaPredicted RBP17.26■□□□□ 0.35
CLN6-204ENST00000564752 PRAMEF9Q5VWM5 478 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 HIST2H2AA3Q6FI13 130 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 KLC3Q6P597 504 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 TRIM40Q6P9F5 258 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 TAOK1Q7L7X3 1001 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 CHERPQ8IWX8 916 aaKnown RBP17.26■□□□□ 0.35
CLN6-204ENST00000564752 CPSF7Q8N684 471 aaKnown RBP17.26■□□□□ 0.35
CLN6-204ENST00000564752 APCDD1LQ8NCL9 501 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 RHEBL1Q8TAI7 183 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 MS4A6EQ96DS6 147 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 FUT8Q9BYC5 575 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 MMACHCQ9Y4U1 282 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 IKBKGQ9Y6K9 419 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 CSMD2Q7Z408 3487 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 PKDREJQ9NTG1 2253 aa17.26■□□□□ 0.35
CLN6-204ENST00000564752 DCHS2Q6V1P9 2916 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 AKAP9Q99996 3911 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 CCDC189A1A4V9 331 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 K7EPI3 171 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 FCHO1O14526 889 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 ALDOAP04075 364 aaKnown RBP17.25■□□□□ 0.35
CLN6-204ENST00000564752 GFAPP14136 432 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 COX6B1P14854 86 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 ZNF24P17028 368 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 ECHS1P30084 290 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 PLA2G16P53816 162 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 RUNX2Q13950 521 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 CDSNQ15517 529 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 TERF2Q15554 542 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 TBCCQ15814 346 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 ADNP2Q6IQ32 1131 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 VN1R5Q7Z5H4 357 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 CEP112Q8N8E3 955 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 OR2L5Q8NG80 312 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 SLC44A1Q8WWI5 657 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 TMEM125Q96AQ2 219 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 NPLQ9BXD5 320 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms